Evidence map›Paper›PMID 35318459›Full record

ArticleJournal of human genetics2022

Six years' accomplishment of the Initiative on Rare and Undiagnosed Diseases: nationwide project in Japan to discover causes, mechanisms, and cures.

Yuji Takahashi, Hidetoshi Date, Hideki Oi, Takeya Adachi, Noriaki Imanishi, En Kimura, Hotake Takizawa, Shinji Kosugi, Naomichi Matsumoto, Kenjiro Kosaki and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 39 citations in OpenAlex.

  1. Functional characterization of a novel ZIP8 variant causing impaired manganese homeostasis and congenital disorders of glycosylation.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2026
    Article
  2. Article
  3. Article
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  5. Skeletal dysplasia and growth disorder withClinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2026
    Article
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  9. Article
  10. Review
  11. Functional assays inGenome research · 2025
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. A novel functionalFrontiers in immunology · 2024
    Article
  20. Loss of function inGenetics in medicine open · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 20 institutions in 1 country.

Yuji TakahashiDepartment of Neurology, National Center Hospital, National Center of Neurology and Psychiatry, Kodaira, Japan.
Hidetoshi DateDepartment of Neurology, National Center Hospital, National Center of Neurology and Psychiatry, Kodaira, Japan.
Hideki OiDepartment of Clinical Data Science, Clinical Research and Education Promotion Division, National Center of Neurology and Psychiatry, Kodaira, Japan.
Takeya AdachiKeio Frontier Research & Education Collaborative Square (K-FRECS) at Tonomachi, Keio University, Kawasaki, Japan.
Noriaki ImanishiJapan Agency for Medical Research and Development (AMED), Tokyo, Japan.
En KimuraDepartment of Neurology, National Center Hospital, National Center of Neurology and Psychiatry, Kodaira, Japan.ORCID http://orcid.org/0000-0002-7865-5918
Hotake TakizawaDepartment of Neurology, National Center Hospital, National Center of Neurology and Psychiatry, Kodaira, Japan.
Shinji KosugiDepartment of Medical Ethics/Medical Genetics, Kyoto University School of Public Health, Kyoto, Japan.ORCID http://orcid.org/0000-0001-6036-6491
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.ORCID http://orcid.org/0000-0001-9846-6500
Kenjiro KosakiCenter for Medical Genetics, Keio University School of Medicine, Tokyo, Japan.
Yoichi MatsubaraNational Center for Child Health and Development, Tokyo, Japan.
IRUD Consortium
Hidehiro MizusawaDepartment of Neurology, National Center Hospital, National Center of Neurology and Psychiatry, Kodaira, Japan. mizusawa@ncnp.go.jp.
National Center of Neurology and Psychiatry · JPNational Center For Child Health and Development · JPShinshu University · JPHiroshima University · JPJapan Agency for Medical Research and Development · JPKeio University · JPThe University of Osaka · JPHamamatsu University School of Medicine · JPHokkaido University · JPKanazawa University Hospital · JPNagoya University · JPTohoku University · JPTokyo Medical and Dental University · JPTottori University · JPAichi Cancer Center · JPAkita University · JPAsahikawa Medical University · JPAstellas Pharma (Japan) · JPChiba University · JPChiba University Hospital · JP

Funding

Japan Agency for Medical Research and Development (AMED) JP16ek0109151Japan Agency for Medical Research and Development (AMED) JP18ek0109301Japan Agency for Medical Research and Development (AMED) JP21ek0109549
6 · The paper itself

Abstract

The identification of causative genetic variants for hereditary diseases has revolutionized clinical medicine and an extensive collaborative framework with international cooperation has become a global trend to understand rare disorders. The Initiative on Rare and Undiagnosed Diseases (IRUD) was established in Japan to provide accurate diagnosis, discover causes, and ultimately provide cures for rare and undiagnosed diseases. The fundamental IRUD system consists of three pillars: IRUD diagnostic coordination, analysis centers (IRUD-ACs), and a data center (IRUD-DC). IRUD diagnostic coordination consists of clinical centers (IRUD-CLs) and clinical specialty subgroups (IRUD-CSSs). In addition, the IRUD coordinating center (IRUD-CC) manages the entire IRUD system and temporarily operates the IRUD resource center (IRUD-RC). By the end of March 2021, 6301 pedigrees consisting of 18,136 individuals were registered in the IRUD. The whole-exome sequencing method was completed in 5136 pedigrees, and a final diagnosis was established in 2247 pedigrees (43.8%). The total number of aberrated genes and pathogenic variants was 657 and 1718, among which 1113 (64.8%) were novel. In addition, 39 novel disease entities or phenotypes with 41 aberrated genes were identified. The 6-year endeavor of IRUD has been an overwhelming success, establishing an all-Japan comprehensive diagnostic and research system covering all geographic areas and clinical specialties/subspecialties. IRUD has accurately diagnosed diseases, identified novel aberrated genes or disease entities, discovered many candidate genes, and enriched phenotypic and pathogenic variant databases. Further promotion of the IRUD is essential for determining causes and developing cures for rare and undiagnosed diseases.

Indexed as

Undiagnosed DiseasesExome SequencingHumansJapanPedigreeRare Diseases

Identifiers

PMID35318459
PMCPMC9402437
OpenAlexW4220669660

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.