Evidence map›Paper›PMID 35317348›Full record

ArticleVirus evolution2022

Unrecognized introductions of SARS-CoV-2 into the US state of Georgia shaped the early epidemic.

Ahmed Babiker, Michael A Martin, Charles Marvil, Stephanie Bellman, Robert A Petit Iii, Heath L Bradley, Victoria D Stittleburg, Jessica Ingersoll, Colleen S Kraft, Yan Li and 6 more

Open access · goldAbstract read
In one paragraph

Article in Virus evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Early unrecognised SARS-CoV-2 introductions shaped the first pandemic wave, Sweden, 2020.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
  2. SARS-CoV-2 molecular testing and whole genome sequencing following RNA recovery from used BinaxNOW COVID-19 antigen self tests.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Ahmed BabikerDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.ORCID https://orcid.org/0000-0003-0578-4871
Michael A MartinDepartment of Biology, Emory University, 201 Dowman Drive, Atlanta, GA 30322, USA.
Charles MarvilDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Stephanie BellmanEnvironmental Health Sciences PhD Program, Laney Graduate School, Emory University, 201 Dowman Drive, Atlanta, GA 30322, USA.
Robert A Petit IiiDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Heath L BradleyDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Victoria D StittleburgDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Jessica IngersollDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Colleen S KraftDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Yan LiDivision of Viral Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road, Atlanta, GA 30333, USA.
Jing ZhangDivision of Viral Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road, Atlanta, GA 30333, USA.
Clinton R PadenDivision of Viral Diseases, Centers for Disease Control and Prevention, 1600 Clifton Road, Atlanta, GA 30333, USA.
Timothy D ReadDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Jesse J WaggonerDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.
Katia KoelleDepartment of Biology, Emory University, 201 Dowman Drive, Atlanta, GA 30322, USA.ORCID https://orcid.org/0000-0002-0254-6141
Anne PiantadosiDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, 201 Dowman Drive, Atlanta, GA 30322, USA.ORCID https://orcid.org/0000-0002-5942-1534
Emory University · USCenters for Disease Control and Prevention · US

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
Medical Scientist Training ProgramT32GM142617 · NIGMS · EMORY UNIVERSITY · PI Jason Yustein · 2022 to 2026
$7.0M
Illumina NovaSeq 6000 High Throughput DNA Sequencer for Emory UniversityS10OD026799 · OD · EMORY UNIVERSITY · PI BOSINGER, STEVEN EDWARD · 2019 to 2019
$985k
Clinical and viral genomic approaches to evaluate the emergence of Powassan virusK08AI139348 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI PIANTADOSI, ANNE L · 2019 to 2022
$752k
Dynamics of influenza genomic diversity across scalesF31AI154738 · NIAID · EMORY UNIVERSITY · PI MARTIN, MICHAEL ANDREW · 2021 to 2021
$42k
NCATS NIH HHS UL1 TR002378NIAID NIH HHS F31 AI154738NIAID NIH HHS K08 AI139348NIGMS NIH HHS T32 GM142617NIH HHS P51 OD011132NIH HHS S10 OD026799
6 · The paper itself

Abstract

In early 2020, as diagnostic and surveillance responses for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ramped up, attention focused primarily on returning international travelers. Here, we build on existing studies characterizing early patterns of SARS-CoV-2 spread within the USA by analyzing detailed clinical, molecular, and viral genomic data from the state of Georgia through March 2020. We find evidence for multiple early introductions into Georgia, despite relatively sparse sampling. Most sampled sequences likely stemmed from a single or small number of introductions from Asia three weeks prior to the state's first detected infection. Our analysis of sequences from domestic travelers demonstrates widespread circulation of closely related viruses in multiple US states by the end of March 2020. Our findings indicate that the exclusive focus on identifying SARS-CoV-2 in returning international travelers early in the pandemic may have led to a failure to recognize locally circulating infections for several weeks and point toward a critical need for implementing rapid, broadly targeted surveillance efforts for future pandemics.

Indexed as

GeorgiaintroductionsSARS-CoV-2travel

Identifiers

PMID35317348
PMCPMC8933693
OpenAlexW4213256655

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.