Evidence map›Paper›PMID 35317099›Full record

ArticleWorld journal of gastroenterology2022

Differential DNA methylation analysis of

Jing-Quan Su, Pin-Yu Lai, Pei-Hsuan Hu, Je-Ming Hu, Pi-Kai Chang, Chao-Yang Chen, Jia-Jheng Wu, Yu-Jyun Lin, Chien-An Sun, Tsan Yang and 3 more

Open access · greenAbstract read
In one paragraph

Article in World journal of gastroenterology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The role of peroxidasin in solid cancer progression.Biochemical Society transactions · 2023
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Jing-Quan SuSchool of Medicine, National Defense Medical Center, Taipei 114, Taiwan.
Pin-Yu LaiSchool of Public Health, National Defense Medical Center, Taipei 114, Taiwan.
Pei-Hsuan HuSchool of Public Health, National Defense Medical Center, Taipei 114, Taiwan.
Je-Ming HuDivision of Colorectal Surgery, Department of surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei 114, Taiwan.
Pi-Kai ChangDivision of Colorectal Surgery, Department of surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei 114, Taiwan.
Chao-Yang ChenDivision of Colorectal Surgery, Department of surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei 114, Taiwan.
Jia-Jheng WuSchool of Public Health, National Defense Medical Center, Taipei 114, Taiwan.
Yu-Jyun LinSchool of Public Health, National Defense Medical Center, Taipei 114, Taiwan.
Chien-An SunDepartment of Public Health, College of Medicine, Fu-Jen Catholic University, New Taipei City 242, Taiwan.
Tsan YangDepartment of Health Business Administration, Meiho University, Pingtung County 912, Taiwan.
Chih-Hsiung HsuSchool of Public Health, National Defense Medical Center, Taipei 114, Taiwan.
Hua-Ching LinDivision of Colorectal Surgery, Department of Surgery, Cheng-Hsin General Hospital, Taipei 112, Taiwan.
Yu-Ching ChouSchool of Public Health, National Defense Medical Center, Taipei 114, Taiwan.
National Defense Medical Center · TWFu Jen Catholic University · TWMeiho University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPatients with colorectal cancer (CRC) undergo surgery, as well as perioperative chemoradiation or adjuvant chemotherapy primarily based on the tumor-node- metastasis (TNM) cancer staging system. However, treatment responses and prognostic outcomes of patients within the same stage vary markedly. The potential use of novel biomarkers can improve prognostication and shared decision making before implementation into certain therapies.

aimTo investigate whether

methodsWe conducted a Taiwanese cohort study involving 208 patients with CRC recruited from Tri-Service General Hospital and applied the candidate gene approach to identify three genes involved in oncogenesis pathways. A methylation-specific polymerase chain reaction (MS-PCR) and EpiTYPER DNA methylation analysis were employed to detect methylation status and to quantify the methylation level of candidate genes in tumor tissue and adjacent normal tissue from participants. We evaluated

resultsWe revealed various outcomes related to methylation and prognosis. Significantly shorter PFS and OS were associated with the CpG_3+CpG_7 hypermethylation of

conclusionOur study found that CpG_3+CpG_7 hypermethylation of

Indexed as

ADAMTS5 ProteinColorectal NeoplasmsDNA MethylationCohort StudiesCpG IslandsDeoxyribonucleosidesHumansPeroxidasesPeroxidasinPrognosisPurine NucleosidesSulfatasesTaiwan5'-O-(9-phenylxanthen-9-yl)-2'-deoxynebularineADAMTS5 ProteinADAMTS5 protein, humanDeoxyribonucleosidesPeroxidasesPeroxidasinPurine NucleosidesPXDN protein, humanSulfatasesSUMF2 protein, humanAdjacent normal tissueBiomarkersColorectal cancerDNA methylationPrognosis predictionTumor tissue

Identifiers

PMID35317099
PMCPMC8900576
OpenAlexW4212847044

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.