Evidence map›Paper›PMID 35316417›Full record

ArticleWorld journal of microbiology & biotechnology2022

Effects of codon optimization, N-terminal truncation and gene dose on the heterologous expression of berberine bridge enzyme.

Zixuan Xu, Liqiong Xia, Mengshan Sun, Peng Huang, Jianguo Zeng

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Zixuan Xu *Hunan University of Chinese Medicine, Changsha, 410128, Hunan, China.
Liqiong Xia *Clinical Pharmacy, Yueyang Hospital of TCM, Yueyang, 414000, Hunan, China.
Mengshan Sun *Hunan Key Laboratory of Traditional Chinese Veterinary Medicine, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Peng HuangHunan Key Laboratory of Traditional Chinese Veterinary Medicine, Hunan Agricultural University, Changsha, 410128, Hunan, China. huangpeng@hunau.edu.cn.
Jianguo ZengHunan University of Chinese Medicine, Changsha, 410128, Hunan, China. zengjianguo@hunau.edu.cn.ORCID http://orcid.org/0000-0003-0428-5990
Hunan University of Traditional Chinese Medicine · CNHunan Agricultural University · CNShanghai University of Traditional Chinese Medicine · CN

Funding

Hunan Innovative Province Construction Special Fund Grant, Yuelu Mountain Seed Industry Innovation Project 2021NK1012Hunan Provincial Key Research and Development Project 2020NK2031Hunan Provincial Natural Science Foundation of China 2020JJ4353Hunan Provincial Natural Science Foundation of China 2021JJ20032The science and technology innovation Program of Hunan Province 2021RC3091
6 · The paper itself

Abstract

Morphine, sanguinarine and chelerythrine are benzylisoquinoline alkaloids (BIAs), and these compounds possess strong biological activities. (S)-scoulerine is a commonly shared precursor of these compounds, and berberine bridge enzyme (BBE) is a key rate-limiting enzyme in the synthesis of (S)-scoulerine. We isolated the BBE gene from Macleaya cordata (McBBE) and used CEN.PK2-1C as a chassis strain. We compared the catalytic efficiency of five codon-optimized McBBE genes in Saccharomyces cerevisiae and finally obtained a yeast strain (YH03) that exhibited a 58-fold increase in yield (1.12 mg/L). Then, we truncated the N-terminus of McBBE by 8 and 22 amino acids and found that with the increase in the number of N-terminal truncated amino acids, the production of (S)-scoulerine gradually decreased. Additionally, we used CRISPR-Cas9 to integrate the McBBE gene at the delta site of the S. cerevisiae genome to achieve stable genetic inheritance and found that the yield of (S)-scoulerine was not significantly increased in the integrated strain. In conclusion, our work achieved high-efficiency expression of McBBE in S. cerevisiae, explored the influence of N-terminal truncation on the yield of (S)-scoulerine, and obtained a genetically stable S. cerevisiae strain with high McBBE expression. This study provides a reference for further complex metabolic engineering optimization and lays a foundation for the efficient biosynthesis of BIAs.

Indexed as

BenzylisoquinolinesSaccharomyces cerevisiaeCodonOxidoreductases, N-DemethylatingBenzylisoquinolinesCodonOxidoreductases, N-Demethylatingreticuline oxidaseBerberine bridge enzymeCodon optimizationCRISPR-Cas9Macleaya cordataN-terminal truncatedSaccharomyces cerevisiae

Identifiers

PMID35316417
OpenAlexW4221110140

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.