Evidence map›Paper›PMID 35314816›Full record

ArticleNature chemical biology2022

Enzymatic assembly of the salinosporamide γ-lactam-β-lactone anticancer warhead.

Katherine D Bauman, Vikram V Shende, Percival Yang-Ting Chen, Daniela B B Trivella, Tobias A M Gulder, Sreekumar Vellalath, Daniel Romo, Bradley S Moore

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
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  13. Antibacterial Polyketides Isolated from the Marine-Derived FungusJournal of fungi (Basel, Switzerland) · 2023
    Article
  14. β-Lactams from the Ocean.Marine drugs · 2023
    Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Katherine D BaumanScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-1154-8189
Vikram V ShendeScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-8396-6297
Percival Yang-Ting ChenScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-7362-9801
Daniela B B TrivellaScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-7505-2345
Tobias A M GulderScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-6013-3161
Sreekumar VellalathDepartment of Chemistry and Biochemistry, Baylor University, Waco, TX, USA.
Daniel RomoDepartment of Chemistry and Biochemistry, Baylor University, Waco, TX, USA.ORCID http://orcid.org/0000-0003-3805-092X
Bradley S MooreScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA. bsmoore@ucsd.edu.ORCID http://orcid.org/0000-0002-4652-1253
Scripps Institution of Oceanography · USBaylor University · US

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Jay C. Nix · 2017 to 2026
$28.6M
ENGINEERING DIVERSITY WITH ENTEROCIN BIOSYNTHESIS GENER01AI047818 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MOORE, BRADLEY S · 2000 to 2022
$5.2M
Salinosporamide Biosynthesis and EngineeringR01CA127622 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MOORE, BRADLEY S · 2007 to 2016
$2.8M
Pharmacophore-Directed  Retrosynthesis Applied to Bioactive Natural Products Informing Mechanism of Action StudiesR35GM134910 · NIGMS · BAYLOR UNIVERSITY · PI DANIEL ROMO · 2020 to 2026
$2.7M
Engineering living medicines: work towards the metabolite rescue of molybdenum cofactor deficiencyF31HD101307 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAUMAN, KATHERINE D · 2020 to 2021
$61k
NCI NIH HHS R01 CA127622NIAID NIH HHS R01 AI047818NICHD NIH HHS F31 HD101307NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R35 GM134910
6 · The paper itself

Abstract

The marine microbial natural product salinosporamide A (marizomib) is a potent proteasome inhibitor currently in clinical trials for the treatment of brain cancer. Salinosporamide A is characterized by a complex and densely functionalized γ-lactam-β-lactone bicyclic warhead, the assembly of which has long remained a biosynthetic mystery. Here, we report an enzymatic route to the salinosporamide core catalyzed by a standalone ketosynthase (KS), SalC. Chemoenzymatic synthesis of carrier protein-tethered substrates, as well as intact proteomics, allowed us to probe the reactivity of SalC and understand its role as an intramolecular aldolase/β-lactone synthase with roles in both transacylation and bond-forming reactions. Additionally, we present the 2.85-Å SalC crystal structure that, combined with site-directed mutagenesis, allowed us to propose a bicyclization reaction mechanism. This work challenges our current understanding of the role of KS enzymes and establishes a basis for future efforts toward streamlined production of a clinically relevant chemotherapeutic.

Indexed as

Biological ProductsLactamsLactonesProteasome InhibitorsPyrrolesBiological ProductsLactamsLactonesProteasome InhibitorsPyrroles

Identifiers

PMID35314816
PMCPMC9058210
OpenAlexW4220868735

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.