Evidence map›Paper›PMID 35314695›Full record

ArticleNature communications2022

An RNA-binding protein acts as a major post-transcriptional modulator in Bacillus anthracis.

Hualiang Pi, Andy Weiss, Clare L Laut, Caroline M Grunenwald, Hannah K Lin, Xinjie I Yi, Devin L Stauff, Eric P Skaar

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. One Earth: The Equilibrium between the Human and the Bacterial Worlds.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hualiang PiDepartment of Pathology, Microbiology, & Immunology, Vanderbilt University Medical Center, Nashville, TN, USA.
Andy WeissDepartment of Pathology, Microbiology, & Immunology, Vanderbilt University Medical Center, Nashville, TN, USA.
Clare L LautDepartment of Pathology, Microbiology, & Immunology, Vanderbilt University Medical Center, Nashville, TN, USA.
Caroline M GrunenwaldDepartment of Pathology, Microbiology, & Immunology, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID http://orcid.org/0000-0003-0286-6345
Hannah K LinDepartment of Biology, Grove City College, Grove City, PA, USA.
Xinjie I YiDepartment of Biology, Grove City College, Grove City, PA, USA.
Devin L StauffDepartment of Biology, Grove City College, Grove City, PA, USA.
Eric P SkaarDepartment of Pathology, Microbiology, & Immunology, Vanderbilt University Medical Center, Nashville, TN, USA. skaar@vumc.org.ORCID http://orcid.org/0000-0001-5094-8105

Funding

TRAINING PROGRAM IN ENVIRONMENTAL TOXICOLOGYT32ES007028 · NIEHS · VANDERBILT UNIVERSITY · PI F PETER Guengerich, Fiona Edith Harrison · 1985 to 2026
$15.7M
Interdisciplinary Training Program in Lung ResearchT32HL094296 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ray Stokes Peebles · 2008 to 2026
$6.3M
Pathobiology of heme inducible transporters in Gram positive pathogensR01AI073843 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SKAAR, ERIC P · 2009 to 2025
$5.9M
Defining the impact of host factors on the molecular architecture and bacterial physiology of Staphylococcus aureus abscessesR01AI145992 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI CASSAT, JAMES E, SKAAR, ERIC P · 2020 to 2024
$3.8M
Defining the molecular inventory of staphylococcal tissue abscesses and its effects on the host-pathogen interfaceF32AI157215 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI WEISS, ANDY · 2021 to 2023
$145k
The role of a Clostridioides difficile P-type ATPase in ferrosome formation and its impact on cellular physiology and pathogenesisK99AI168483 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PI, HUALIANG · 2022 to 2023
$141k
The regulatory role of an RNA binding protein in two-component signaling and its impact on cellular physiology and anthrax pathogenesisF32AI161860 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PI, HUALIANG · 2021 to 2021
$71k
NHLBI NIH HHS T32 HL094296NIAID NIH HHS F32 AI157215NIAID NIH HHS F32 AI161860NIAID NIH HHS K99 AI168483NIAID NIH HHS R01 AI073843NIAID NIH HHS R01 AI145992NIEHS NIH HHS T32 ES007028
6 · The paper itself

Abstract

HitRS is a two-component system that responds to cell envelope damage in the human pathogen Bacillus anthracis. Here we identify an RNA-binding protein, KrrA, that regulates HitRS function by modulating the stability of the hitRS mRNA. In addition to hitRS, KrrA binds to over 70 RNAs and, directly or indirectly, affects the expression of over 150 genes involved in multiple processes, including genetic competence, sporulation, RNA turnover, DNA repair, transport, and cellular metabolism. KrrA does not exhibit detectable nuclease activity in vitro, and thus the mechanism by which it modulates mRNA stability remains unclear.

Indexed as

Bacillus anthracisBacterial ProteinsCell WallGene Expression Regulation, BacterialHumansRNA-Binding ProteinsBacterial ProteinsRNA-Binding Proteins

Identifiers

PMID35314695
PMCPMC8938561

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.