Evidence map›Paper›PMID 35314193›Full record

ArticleThe Journal of biological chemistry2022

Fission yeast Duf89 and Duf8901 are cobalt/nickel-dependent phosphatase-pyrophosphatases that act via a covalent aspartyl-phosphate intermediate.

Ana M Sanchez, Agata Jacewicz, Stewart Shuman

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ana M SanchezMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA; Gerstner Sloan Kettering Graduate School of Biomedical Sciences, New York, New York, USA.
Agata JacewiczMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Stewart ShumanMolecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA. Electronic address: shumans@mskcc.org.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
Mechanisms of DNA and RNA TransactionsR35GM126945 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI Stewart H Shuman · 2018 to 2026
$8.9M
NCI NIH HHS P30 CA008748NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R35 GM126945
6 · The paper itself

Abstract

Domain of Unknown Function 89 (DUF89) proteins are metal-dependent phosphohydrolases. Exemplary DUF89 enzymes differ in their metal and phosphosubstrate preferences. Here, we interrogated the activities and structures of two DUF89 paralogs from fission yeast-Duf89 and Duf8901. We find that Duf89 and Duf8901 are cobalt/nickel-dependent phosphohydrolases adept at hydrolyzing p-nitrophenylphosphate and PP

Indexed as

PyrophosphatasesSchizosaccharomycesSchizosaccharomyces pombe ProteinsCobaltCrystallography, X-RayNickelPhosphatesProtein ConformationCobaltNickelPhosphatesPyrophosphatasesSchizosaccharomyces pombe Proteinsenzyme mechanismphosphataseprotein structureSchizosaccharomyces pombeX-ray crystallography

Identifiers

PMID35314193
PMCPMC9062747

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.