Evidence map›Paper›PMID 35312102›Full record

ArticleJournal of cellular biochemistry2022

HEPES-buffering of bicarbonate-containing culture medium perturbs lysosomal glucocerebrosidase activity.

Martijn J C van der Lienden, Jan Aten, Rolf G Boot, Marco van Eijk, Johannes M F G Aerts, Chi-Lin Kuo

Open access · hybridAbstract read
In one paragraph

Article in Journal of cellular biochemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Martijn J C van der LiendenDepartment of Medical Biochemistry, Leiden University, Leiden, The Netherlands.ORCID 0000-0002-6458-1479
Jan AtenDepartment of Pathology, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.
Rolf G BootDepartment of Medical Biochemistry, Leiden University, Leiden, The Netherlands.
Marco van EijkDepartment of Medical Biochemistry, Leiden University, Leiden, The Netherlands.
Johannes M F G AertsDepartment of Medical Biochemistry, Leiden University, Leiden, The Netherlands.
Chi-Lin KuoDepartment of Medical Biochemistry, Leiden University, Leiden, The Netherlands.
Leiden University · NLAmsterdam University Medical Centers · NL

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek BBOL-2007247202
6 · The paper itself

Abstract

Glucocerebrosidase (GCase), encoded by the GBA gene, degrades the ubiquitous glycosphingolipid glucosylceramide. Inherited GCase deficiency causes Gaucher disease (GD). In addition, carriers of an abnormal GBA allele are at increased risk for Parkinson's disease. GCase undergoes extensive modification of its four N-glycans en route to and inside the lysosome that is reflected in changes in molecular weight as detected with sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Fluorescent activity-based probes (ABPs) that covalently label GCase in reaction-based manner in vivo and in vitro allow sensitive visualization of GCase molecules. Using these ABPs, we studied the life cycle of GCase in cultured fibroblasts and macrophage-like RAW264.7 cells. Specific attention was paid to the impact of 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) supplementation to bicarbonate-buffered medium. Here, we report how HEPES-buffered medium markedly influences processing of GCase, its lysosomal degradation, and the total cellular enzyme level. HEPES-containing medium was also found to reduce maturation of other lysosomal enzymes (α-glucosidase and β-glucuronidase) in cells. The presence of HEPES in bicarbonate containing medium increases GCase activity in GD-patient derived fibroblasts, illustrating how the supplementation of HEPES complicates the use of cultured cells for diagnosing GD.

Indexed as

Gaucher DiseaseGlucosylceramidaseBicarbonatesHEPESHumansLysosomesBicarbonatesGlucosylceramidaseHEPEScell culture mediumdiagnosisGaucher diseaseglucocerebrosidaseglucosylsphingosinelysosome

Identifiers

PMID35312102
PMCPMC9314694
OpenAlexW4220693538

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.