Evidence map›Paper›PMID 35311585›Full record

ArticleMicrobiology spectrum2022

Molecular Evolution of Attachment Glycoprotein (G) and Fusion Protein (F) Genes of Respiratory Syncytial Virus ON1 and BA9 Strains in Xiamen, China.

Yong-Peng Sun, Si-Yu Lei, Ying-Bin Wang, Yi-Zhen Wang, Hong-Sheng Qiang, Yi-Fan Yin, Ze-Min Jiang, Min Zhu, Xiao-Li Chen, Hui-Ming Ye and 2 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Yong-Peng Sun *State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Si-Yu Lei *State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Ying-Bin Wang *State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Yi-Zhen WangState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Hong-Sheng QiangState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Yi-Fan YinState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Ze-Min JiangState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Min ZhuDepartment of Clinical Laboratory, Women and Children's Hospital, School of Medicine, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Xiao-Li ChenDepartment of Clinical Laboratory, Women and Children's Hospital, School of Medicine, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Hui-Ming YeDepartment of Clinical Laboratory, Women and Children's Hospital, School of Medicine, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Zi-Zheng ZhengState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.ORCID 0000-0003-0099-4212
Ning-Shao XiaState Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, National Institute of Diagnostics and Vaccine Development in Infectious Diseases, School of Public Health, Xiamen Universitygrid.12955.3a, Xiamen, Fujian, People's Republic of China.
Xiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monitoring viral transmission and analyzing the genetic diversity of a virus are imperative to better understand its evolutionary history and the mechanism driving its evolution and spread. Especially, effective monitoring of key antigenic mutations and immune escape variants caused by these mutations has great scientific importance. Thus, to further understand the molecular evolutionary dynamics of respiratory syncytial virus (RSV) circulating in China, we analyzed nasopharyngeal swab specimens derived from hospitalized children ≤5 years old with acute respiratory tract infections (ARIs) in Xiamen during 2016 to 2019. We found that infants under 6 months of age (52.0%) were the main population with RSV infection. The prevalent pattern "BBAA" of RSV was observed during the epidemic seasons. RSV ON1 and BA9 genotypes were the dominant circulating strains in Xiamen. Interestingly, we observed four Xiamen-specific amino acid substitution combinations in the G protein and several amino acid mutations primarily occurring at antigenic sites Ø and V in the F protein. Our analyses suggest that introduction of new viruses and local evolution are shaping the diversification of RSV strains in Xiamen. This study provides new insights on the evolution and spread of the ON1 and BA9 genotypes at local and global scales.

Indexed as

Respiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsAmino AcidsChildChild, PreschoolEvolution, MolecularGenotypeGlycoproteinsHumansInfantPhylogenyAmino AcidsGlycoproteinsattachment glycoproteinfusion proteinhospitalized childrenmolecular epidemiologyRSV

Identifiers

PMID35311585
PMCPMC9045328
OpenAlexW4220996213

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.