Evidence map›Paper›PMID 35311472›Full record

ArticleRNA biology2022

Alternative splicing diversifies the transcriptome and proteome of the rice blast fungus during host infection.

Jongbum Jeon, Ki-Tae Kim, Jaeyoung Choi, Kyeongchae Cheong, Jaeho Ko, Gobong Choi, Hyunjun Lee, Gir-Won Lee, Sook-Young Park, Seongbeom Kim and 4 more

Open access · goldAbstract read
In one paragraph

Article in RNA biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Jongbum JeonInterdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, Korea.
Ki-Tae KimDepartment of Agricultural Life Science, Sunchon National University, Suncheon, Korea.
Jaeyoung ChoiSmart Farm Research Center, Korea Institute of Science and Technology, Gangneung, Korea.ORCID 0000-0003-2206-4593
Kyeongchae CheongInterdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, Korea.
Jaeho KoDepartment of Agricultural Biotechnology, Seoul National University, Seoul, Korea.
Gobong ChoiInterdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, Korea.
Hyunjun LeeDepartment of Agricultural Biotechnology, Seoul National University, Seoul, Korea.
Gir-Won LeeNGeneBio Co Ltd, Korea.
Sook-Young ParkDepartment of Agricultural Life Science, Sunchon National University, Suncheon, Korea.ORCID 0000-0003-1267-1111
Seongbeom KimDepartment of Agricultural Biotechnology, Seoul National University, Seoul, Korea.
Sun Tae KimDepartment of Plant Bioscience, Pusan National University, Miryang, Korea.
Cheol Woo MinDepartment of Plant Bioscience, Pusan National University, Miryang, Korea.
Seogchan KangDepartment of Plant Pathology and Environmental Microbiology, Pennsylvania State University, University Park, PA USA.
Yong-Hwan LeeInterdisciplinary Program in Agricultural Genomics, Seoul National University, Seoul, Korea.ORCID 0000-0003-2462-1250
Seoul National University · KRSunchon National University · KRKorea Institute of Science and Technology · KRPennsylvania State University · USPusan National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative splicing (AS) contributes to diversifying and regulating cellular responses to environmental conditions and developmental cues by differentially producing multiple mRNA and protein isoforms from a single gene. Previous studies on AS in pathogenic fungi focused on profiling AS isoforms under a limited number of conditions. We analysed AS profiles in the rice blast fungus

Indexed as

MagnaportheOryzaAlternative SplicingAscomycotaFungal ProteinsPlant DiseasesProteomeProteomicsTranscriptomeFungal ProteinsProteomeAlternative splicingfunctional diversificationmagnaporthe oryzaepathogenicityproteomericetranscriptome

Identifiers

PMID35311472
PMCPMC8942408
OpenAlexW4220733442

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.