Evidence map›Paper›PMID 35310635›Full record

ArticleFrontiers in plant science2022

GWAS to Identify Novel QTNs for WSCs Accumulation in Wheat Peduncle Under Different Water Regimes.

Arpit Gaur, Yogesh Jindal, Vikram Singh, Ratan Tiwari, Dinesh Kumar, Deepak Kaushik, Jogendra Singh, Sneh Narwal, Sarika Jaiswal, Mir Asif Iquebal and 5 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Drought-tolerant wheat for enhancing global food security.Functional & integrative genomics · 2024
    Review
  7. GWAS elucidated grain yield genetics in Indian spring wheat under diverse water conditions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Arpit GaurDepartment of Genetics and Plant Breeding, CCS Haryana Agricultural University, Hisar, India.
Yogesh JindalDepartment of Genetics and Plant Breeding, CCS Haryana Agricultural University, Hisar, India.
Vikram SinghDepartment of Genetics and Plant Breeding, CCS Haryana Agricultural University, Hisar, India.
Ratan TiwariICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Dinesh KumarICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Deepak KaushikDepartment of Genetics and Plant Breeding, CCS Haryana Agricultural University, Hisar, India.
Jogendra SinghICAR-Central Soil Salinity Research Institute, Karnal, India.
Sneh NarwalICAR-Indian Agricultural Research Institute, New Delhi, India.
Sarika JaiswalICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Mir Asif IquebalICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Ulavapp B AngadiICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Gyanendra SinghICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Anil RaiICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Gyanendra Pratap SinghICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Sonia SheoranICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Indian Agricultural Statistics Research Institute · INIndian Institute of Wheat and Barley Research · INChaudhary Charan Singh Haryana Agricultural University · INCentral Soil Salinity Research Institute · INIndian Agricultural Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Water-soluble carbohydrates (WSCs) play a vital role in water stress avoidance and buffering wheat grain yield. However, the genetic architecture of stem WSCs' accumulation is partially understood, and few candidate genes are known. This study utilizes the compressed mixed linear model-based genome wide association study (GWAS) and heuristic post GWAS analyses to identify causative quantitative trait nucleotides (QTNs) and candidate genes for stem WSCs' content at 15 days after anthesis under different water regimes (irrigated, rainfed, and drought). Glucose, fructose, sucrose, fructans, total non-structural carbohydrates (the sum of individual sugars), total WSCs (anthrone based) quantified in the peduncle of 301 bread wheat genotypes under multiple environments (E01-E08) pertaining different water regimes, and 14,571 SNPs from "35K Axiom Wheat Breeders" Array were used for analysis. As a result, 570 significant nucleotide trait associations were identified on all chromosomes except for 4D, of which 163 were considered stable. A total of 112 quantitative trait nucleotide regions (QNRs) were identified of which 47 were presumable novel. QNRs

Indexed as

bread wheatgene prioritizationGWASQTNwater soluble carbohydrateswater stress

Identifiers

PMID35310635
PMCPMC8928439
OpenAlexW4214842950

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.