Evidence map›Paper›PMID 35308953›Full record

ArticleAMIA ... Annual Symposium proceedings. AMIA Symposium2021

A Fusion NLP Model for the Inference of Standardized Thyroid Nodule Malignancy Scores from Radiology Report Text.

Thiago Santos, Omar N Kallas, Janice Newsome, Daniel Rubin, Judy Wawira Gichoya, Imon Banerjee

Abstract read
In one paragraph

Article in AMIA ... Annual Symposium proceedings. AMIA Symposium, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Thiago SantosDepartment of Computer Science, Emory University, Atlanta, GA, USA.
Omar N KallasDepartment of Radiology, Emory School of Medicine, Atlanta, GA, USA.
Janice NewsomeDepartment of Radiology, Emory School of Medicine, Atlanta, GA, USA.
Daniel RubinDepartment of Biomedical Data Science, Stanford University School of Medicine, Palo Alto, CA, USA.
Judy Wawira GichoyaDepartment of Radiology, Emory School of Medicine, Atlanta, GA, USA.
Imon BanerjeeDepartment of Radiology, Emory School of Medicine, Atlanta, GA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Radiology reports are a rich resource for advancing deep learning applications for medical images, facilitating the generation of large-scale annotated image databases. Although the ambiguity and subtlety of natural language poses a significant challenge to information extraction from radiology reports. Thyroid Imaging Reporting and Data Systems (TI-RADS) has been proposed as a system to standardize ultrasound imaging reports for thyroid cancer screening and diagnosis, through the implementation of structured templates and a standardized thyroid nodule malignancy risk scoring system; however there remains significant variation in radiologist practice when it comes to diagnostic thyroid ultrasound interpretation and reporting. In this work, we propose a computerized approach using a contextual embedding and fusion strategy for the large-scale inference of TI-RADS final assessment categories from narrative ultrasound (US) reports. The proposed model has achieved high accuracy on an internal data set, and high performance scores on an external validation dataset.

Indexed as

RadiologyThyroid NeoplasmsThyroid NoduleData SystemsHumansRetrospective Studies

Identifiers

PMID35308953
PMCPMC8861701

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.