Evidence map›Paper›PMID 35307352›Full record

ArticleThe Journal of biological chemistry2022

Purine biosynthetic enzymes assemble into liquid-like condensates dependent on the activity of chaperone protein HSP90.

Anthony M Pedley, Jack P Boylan, Chung Yu Chan, Erin L Kennedy, Minjoung Kyoung, Stephen J Benkovic

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 44 citations in OpenAlex.

  1. Chemical reviews · 2026
    Review
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  6. Coordination of cell organelles to promote metabolon formation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  7. Review
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  9. Article
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  17. Regulatory mechanisms of one-carbon metabolism enzymes.The Journal of biological chemistry · 2023
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Anthony M PedleyDepartment of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, USA.
Jack P BoylanDepartment of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, USA.
Chung Yu ChanDepartment of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, USA.
Erin L KennedyDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County, Baltimore, Maryland, USA.
Minjoung KyoungDepartment of Chemistry and Biochemistry, University of Maryland Baltimore County, Baltimore, Maryland, USA.
Stephen J BenkovicDepartment of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, USA. Electronic address: sjb1@psu.edu.
Pennsylvania State University · USUniversity of Maryland, Baltimore County · US

Funding

EXPAND PARTICIPATION BY MINORITIES IN BIOMEDICAL SCIENCER25GM055036 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SUMMERS, MICHAEL FINLEY · 1996 to 2021
$16.9M
TRANSFORMYLASE ENZYMES--DIHYDROFOLATE REDUCTASER01GM024129 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BENKOVIC, STEPHEN J · 1985 to 2024
$5.2M
Graduate Training at The Chemistry Biology InterfaceT32GM066706 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L, SMITH, AARON T · 2004 to 2023
$3.3M
4D functional mapping of glucose metabolism in Living CellsR01GM134086 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI KYOUNG, MINJOUNG · 2019 to 2023
$1.6M
NIGMS NIH HHS R01 GM024129NIGMS NIH HHS R01 GM134086NIGMS NIH HHS R25 GM055036NIGMS NIH HHS T32 GM066706
6 · The paper itself

Abstract

Enzymes within the de novo purine biosynthetic pathway spatially organize into dynamic intracellular assemblies called purinosomes. The formation of purinosomes has been correlated with growth conditions resulting in high purine demand, and therefore, the cellular advantage of complexation has been hypothesized to enhance metabolite flux through the pathway. However, the properties of this cellular structure are unclear. Here, we define the purinosome in a transient expression system as a biomolecular condensate using fluorescence microscopy. We show that purinosomes, as denoted by formylglycinamidine ribonucleotide synthase granules in purine-depleted HeLa cells, are spherical and appear to coalesce when two come into contact, all liquid-like characteristics that are consistent with previously reported condensates. We further explored the biophysical and biochemical means that drive the liquid-liquid phase separation of these structures. We found that the process of enzyme condensation into purinosomes is likely driven by the oligomeric state of the pathway enzymes and not a result of intrinsic disorder, the presence of low-complexity domains, the assistance of RNA scaffolds, or changes in intracellular pH. Finally, we demonstrate that the heat shock protein 90 KDa helps to regulate the physical properties of the condensate and maintain their liquid-like state inside HeLa cells. We show that disruption of heat shock protein 90 KDa activity induced the transformation of formylglycinamidine ribonucleotide synthase clusters into more irregularly shaped condensates, suggesting that its chaperone activity is essential for purinosomes to retain their liquid-like properties. This refined view of the purinosome offers new insight into how metabolic enzymes spatially organize into dynamic condensates within human cells.

Indexed as

HSP90 Heat-Shock ProteinsPurinesHeLa CellsHumansMolecular ChaperonesRibonucleotidesHSP90 Heat-Shock ProteinsMolecular ChaperonesPurinesRibonucleotidesliquid condensateliquid–liquid phase separationmetabolismprotein complexpurine biosynthesis

Identifiers

PMID35307352
PMCPMC9034097
OpenAlexW4220668939

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.