Evidence map›Paper›PMID 35307305›Full record

ArticleHematology, transfusion and cell therapy

GATA2 variants in patients with non-tuberculous mycobacterial or fungal infections without known immunodeficiencies.

Daniela P Mendes-de-Almeida, Francianne G Andrade, Filipe V Dos Santos-Bueno, Dayvison F Saraiva Freitas, Sheila C Soares-Lima, Rosely M Zancopé-Oliveira, Maria S Pombo-de-Oliveira

Open access · diamondAbstract read
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Article in Hematology, transfusion and cell therapy. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Daniela P Mendes-de-AlmeidaInstituto Nacional de Infectologia Evandro Chagas, Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, RJ, Brazil; Instituto Nacional de Câncer (INCA), Rio de Janeiro, RJ, Brazil; University of Minnesota, Minneapolis, MN, USA. Electronic address: daniela.almeida@ini.fiocruz.br.
Francianne G AndradeInstituto Nacional de Câncer (INCA), Rio de Janeiro, RJ, Brazil.
Filipe V Dos Santos-BuenoInstituto Nacional de Câncer (INCA), Rio de Janeiro, RJ, Brazil.
Dayvison F Saraiva FreitasInstituto Nacional de Infectologia Evandro Chagas, Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, RJ, Brazil.
Sheila C Soares-LimaInstituto Nacional de Câncer (INCA), Rio de Janeiro, RJ, Brazil.
Rosely M Zancopé-OliveiraInstituto Nacional de Infectologia Evandro Chagas, Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, RJ, Brazil.
Maria S Pombo-de-OliveiraInstituto Nacional de Câncer (INCA), Rio de Janeiro, RJ, Brazil.
Instituto Nacional de Câncer - INCA · BRFundação Oswaldo Cruz · BRUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionHaploinsufficiency of the hematopoietic transcription factor GATA2 is associated with a broad spectrum of diseases, including infection susceptibility and neoplasms. We aimed to investigate GATA2 variants in patients with non-tuberculous mycobacterial (NTM) and/or fungal infections (FI) without known immunodeficiencies.

methodWe performed GATA2 genotyping in patients with NTM and/or FI.

resultsTwenty-two patients were enrolled (seventeen FI, four NTM and one with both infections). The pathogenic variant NG_029334.1:g.16287C>T was found in one patient (4.5%) and two asymptomatic offsprings. We also found the likely-benign variant NG_029334.1:g.12080G>A (rs2335052), the benign variant NG_029334.1:g.16225C>T (rs11708606) and the variant of uncertain significance NG_029334.1:g.16201G>A (rs369850507) in 18.2%, 27.3%, and 4.5% of the cases, respectively. Malignant diseases were additionally diagnosed in six patients.

conclusionAlthough detected in 45.4% of the patients, most GATA2 variants were benign or likely benign. Identifying a pathogenic variant was essential for driving both the patient's treatment and familial counseling. Pathogenic variants carriers should receive genetic counseling, subsequent infection prevention measures and malignancies surveillance. Additionally, case-control genotyping should be carried out in Brazil to investigate whether the observed variants may be associated with susceptibility to opportunistic infections and/or concurrent neoplasms.

Indexed as

Fungal infectionGATA2 transcription factorMonoMAC syndromeNon-tuberculous mycobacterial infectionPrimary immunodeficiency

Identifiers

PMID35307305
PMCPMC10244242
OpenAlexW4220770223

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.