Evidence map›Paper›PMID 35306567›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2022

Main effect and epistatic QTL affecting spike shattering and association with plant height revealed in two spring wheat (Triticum aestivum L.) populations.

Firdissa E Bokore, Richard D Cuthbert, Ron E Knox, Heather L Campbell, Brad Meyer, Amidou N'Diaye, Curtis J Pozniak, Ron DePauw

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Plant biochemical genetics in the multiomics era.Journal of experimental botany · 2023
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Firdissa E BokoreSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, 1 Airport Road, P.O. Box 1030, Swift Current, SK, S9H 3X2, Canada. firdissa.bokore@agr.gc.ca.ORCID http://orcid.org/0000-0002-1073-9816
Richard D CuthbertSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, 1 Airport Road, P.O. Box 1030, Swift Current, SK, S9H 3X2, Canada. richard.cuthbert@agr.gc.ca.
Ron E KnoxSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, 1 Airport Road, P.O. Box 1030, Swift Current, SK, S9H 3X2, Canada.
Heather L CampbellSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, 1 Airport Road, P.O. Box 1030, Swift Current, SK, S9H 3X2, Canada.
Brad MeyerSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, 1 Airport Road, P.O. Box 1030, Swift Current, SK, S9H 3X2, Canada.
Amidou N'DiayeDepartment of Plant Sciences and Crop Development Centre, University of Saskatchewan, 51 Campus Drive, Saskatoon, SK, S7N 5A8, Canada.
Curtis J PozniakDepartment of Plant Sciences and Crop Development Centre, University of Saskatchewan, 51 Campus Drive, Saskatoon, SK, S7N 5A8, Canada.
Ron DePauwAdvancing Wheat Technologies, 118 Strathcona Rd SW, Calgary, AB, T3H 1P3, Canada.
Agriculture and Agri-Food Canada · CAUniversity of Saskatchewan · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA major QTL on chromosome arm 4BS was associated with reduced spike shattering and reduced plant height in coupling phase, and a second major QTL associated with reduced spike shattering was detected on chromosome arm 5AL in the same wheat variety Carberry. Spike shattering can cause severe grain yield loss in wheat. Development of cultivars with reduced shattering but having easy mechanical threshability is the target of wheat breeding programs. This study was conducted to determine quantitative trait loci (QTL) associated with shattering resistance, and epistasis among QTL in the populations Carberry/AC Cadillac and Carberry/Thatcher. Response of the populations to spike shattering was evaluated near Swift Current, SK, in four to five environments. Plant height data recorded in different locations and years were used to determine the relationship of the trait with spike shattering. Each population was genotyped and mapped with the wheat 90 K Illumina iSelect SNP array. Main effect QTL were analyzed by MapQTL 6, and epistatic interactions between main effect QTL were determined by QTLNetwork 2.0. Correlations between height and shattering ranged from 0.15 to 0.49. Carberry contributed two major QTL associated with spike shattering on chromosome arms 4BS and 5AL, detected in both populations. Carberry also contributed two minor QTL on 7AS and 7AL. AC Cadillac contributed five minor QTL on 1AL, 2DL, 3AL, 3DL and 7DS. Nine epistatic QTL interactions were identified, out of which the most consistent and synergistic interaction, that reduced the expression of shattering, occurred between 4BS and 5AL QTL. The 4BS QTL was consistently associated with reduced shattering and reduced plant height in the coupling phase. The present findings shed light on the inheritance of shattering resistance and provide genetic markers for manipulating the trait to develop wheat cultivars.

Indexed as

BasidiomycotaQuantitative Trait LociChromosome MappingChromosomes, PlantDisease ResistancePhenotypePlant BreedingPlant DiseasesTriticum

Identifiers

PMID35306567
PMCPMC9033718
OpenAlexW4220818334

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.