Evidence map›Paper›PMID 35302986›Full record

ArticlePLoS biology2022

Quantitative input-output dynamics of a c-di-GMP signal transduction cascade in Vibrio cholerae.

Andrew A Bridges, Jojo A Prentice, Chenyi Fei, Ned S Wingreen, Bonnie L Bassler

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Discovery of Novel c-di-GMP-Related Genes inPathogens (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Quorum sensing orchestrates parallel cell death pathways inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Functional analysis of cyclic diguanylate-modulating proteins inbioRxiv : the preprint server for biology · 2024
    Article
  11. Quorum sensing orchestrates parallel cell death pathways inbioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. Article
  14. Control of biofilm formation by anProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Review
  17. Control of Biofilm Formation by anbioRxiv : the preprint server for biology · 2023
    Article
  18. TheMicrobiology (Reading, England) · 2023
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Andrew A BridgesDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0002-8132-751X
Jojo A PrenticeDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Chenyi FeiDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0002-8287-4347
Ned S WingreenDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0001-7384-2821
Bonnie L BasslerDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.ORCID 0000-0002-0043-746X
Princeton University · USHoward Hughes Medical Institute · US

Funding

Thermally robust chemotaxis and thermotaxis in Escherichia coliR01GM082938 · NIGMS · PRINCETON UNIVERSITY · PI WINGREEN, NED S · 2008 to 2025
$5.5M
Intra- and Inter- Species Communication in BacteriaR37GM065859 · NIGMS · PRINCETON UNIVERSITY · PI BASSLER, BONNIE L · 2016 to 2025
$3.4M
Quantitative Imaging and Analysis of Bacterial Biofilms from the Single Cell to the CollectiveR21AI146223 · NIAID · PRINCETON UNIVERSITY · PI BASSLER, BONNIE L, STONE, HOWARD · 2019 to 2020
$446k
This way out: Spatiotemporal regulation of Vibrio cholerae biofilm dispersalK99AI158939 · NIAID · PRINCETON UNIVERSITY · PI BRIDGES, ANDREW A. · 2021 to 2022
$138k
Howard Hughes Medical Institute DRG-2302-17NIAID NIH HHS K99 AI158939NIAID NIH HHS R21 AI146223NIGMS NIH HHS R01 GM082938NIGMS NIH HHS R37 GM065859
6 · The paper itself

Abstract

Bacterial biofilms are multicellular communities that collectively overcome environmental threats and clinical treatments. To regulate the biofilm lifecycle, bacteria commonly transduce sensory information via the second messenger molecule cyclic diguanylate (c-di-GMP). Using experimental and modeling approaches, we quantitatively capture c-di-GMP signal transmission via the bifunctional polyamine receptor NspS-MbaA, from ligand binding to output, in the pathogen Vibrio cholerae. Upon binding of norspermidine or spermidine, NspS-MbaA synthesizes or degrades c-di-GMP, respectively, which, in turn, drives alterations specifically to biofilm gene expression. A long-standing question is how output specificity is achieved via c-di-GMP, a diffusible molecule that regulates dozens of effectors. We show that NspS-MbaA signals locally to specific effectors, sensitizing V. cholerae to polyamines. However, local signaling is not required for specificity, as changes to global cytoplasmic c-di-GMP levels can selectively regulate biofilm genes. This work establishes the input-output dynamics underlying c-di-GMP signaling, which could be useful for developing bacterial manipulation strategies.

Indexed as

Vibrio choleraeBiofilmsCyclic GMPSignal Transductionbis(3',5')-cyclic diguanylic acidCyclic GMP

Identifiers

PMID35302986
PMCPMC8967002
OpenAlexW4226039324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.