ArticleMolecular biology reports2022
Analysis of genetic diversity among common bean germplasm by start codon targeted (SCoT) markers.
Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- Investigating the genetic potential of Ashwagandha (Withania somnifera L. Dunal) germplasm through SCoT and EST-SSR molecular markers.Scientific reports · 2026Article
- Assessing mung bean genetic diversity with Start Codon Targeted (SCoT) markers: a step towards climate-tolerant varieties for global food security.BMC plant biology · 2026Article
- Start codon targeted (SCoT) based molecular diversity and population structure analysis in black turmeric (Curcuma caesia Roxb.).BMC plant biology · 2026Article
- Unveiling genetic diversity and population structure in lentil (Lens culinaris) germplasm through scot markers.Molecular biology reports · 2025Article
- Genetic diversity and population structure analysis of Indian blackberry (Syzygium cumini L.) using CAAT box‑derived polymorphism (CBDP) and start codon targeted polymorphism (SCoT) markers.Journal, genetic engineering & biotechnology · 2025Article
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- Genetic marker: a genome mapping tool to decode genetic diversity of livestock animals.Frontiers in genetics · 2024Review
- Molecular phylogeny of plant pathogenic fungi based on start codon targeted (SCoT) polymorphism.Molecular biology reports · 2023Article
- Efficiency of RAPD and SCoT Markers in the Genetic Diversity Assessment of the Common Bean.Plants (Basel, Switzerland) · 2023Article
- Deciphering the level of genetic diversity in some aegilops species using CAAT box-derived polymorphism (CBDP) and start codon target polymorphism (SCoT) markers.Molecular biology reports · 2023Article
- Investigating the geographical, phenotypic and genetic diversity of Sickleweed populations by bioclimatic parameters, morphological traits and SCoT molecular markers.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- Genetic diversity and population structure of Saccharomyces cerevisiae isolated from Turkish sourdough by iPBS-retrotransposons markers.Archives of microbiology · 2022Article
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Authors and funding
6 authors.
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No grant is acknowledged in the PubMed record.
Abstract
backgroundBreeding strategies to improve modern varieties having high yield, high nutritional value and resistance to biotic and abiotic stress, etc. is very important to make up for the food deficiencies. Molecular studies as a tool in breeding programs for the characterization of germplasm have been performed with several DNA marker systems. MATERIALS AND
methodsIn the present study, the genetic diversity of 53 common bean landraces and 22 registered varieties from Turkey, and 12 genotypes from USDA was investigated using start codon targeted (SCoT) markers for the first time worldwide. The 8 primers having stronger and more polymorphic bands were used for PCR amplification.
resultsThe mean polymorphic band of all primers was found as 13.13. The average of polymorphic information content and resolving power values was 0.34 and 7.55, respectively. Analysis of molecular variance (AMOVA) explored the existence of higher genetic diversity within populations accounting for 92% compared to among populations variations. According to cluster analysis (UPGMA) and genetic structure based on SCoT data, accessions were separated into Andean (PopA) and Mesoamerican PopB) gene pools. Moreover, accessions were mostly placed in the same groups/subgroups according to their geographical origin.
conclusionsA high level of genetic diversity was observed between the investigated accessions in this work. The findings will help to plant breeders to characterize common bean accessions.
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