Evidence map›Paper›PMID 35301148›Full record

ReviewDrug discovery today2022

Structure-based drug repurposing: Traditional and advanced AI/ML-aided methods.

Chinmayee Choudhury, N Arul Murugan, U Deva Priyakumar

Abstract readReview
In one paragraph

Review in Drug discovery today, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chinmayee ChoudhuryDepartment of Experimental Medicine and Biotechnology, Postgraduate Institute of Medical Education and Research, Sector-12, Chandigarh 160012, India.
N Arul MuruganDepartment of Computer Science, School of Electrical Engineering and Computer Sciences, KTH Royal Institute of Technology, S-100 44, Stockholm, Sweden; Department of Computational Biology, Indraprastha Institute of Information Technology, New Delhi 110020, India. Electronic address: murugan@kth.se.
U Deva PriyakumarCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad 500 032, India. Electronic address: deva@iiit.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current global health emergency in the form of the Coronavirus 2019 (COVID-19) pandemic has highlighted the need for fast, accurate, and efficient drug discovery pipelines. Traditional drug discovery projects relying on in vitro high-throughput screening (HTS) involve large investments and sophisticated experimental set-ups, affordable only to big biopharmaceutical companies. In this scenario, application of efficient state-of-the-art computational methods and modern artificial intelligence (AI)-based algorithms for rapid screening of repurposable chemical space [approved drugs and natural products (NPs) with proven pharmacokinetic profiles] to identify the initial leads is a powerful option to save resources and time. Structure-based drug repurposing is a popular in silico repurposing approach. In this review, we discuss traditional and modern AI-based computational methods and tools applied at various stages for structure-based drug discovery (SBDD) pipelines. Additionally, we highlight the role of generative models in generating molecules with scaffolds from repurposable chemical space.

Indexed as

COVID-19 Drug TreatmentDrug RepositioningArtificial IntelligenceDrug DiscoveryHumansPandemicsDrug repurposingForce fieldGenerative modelingInverse designMachine learningQuantum mechanics

Identifiers

PMID35301148
PMCPMC8920090

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.