Evidence map›Paper›PMID 35298633›Full record

ReviewJournal of experimental botany2022

Encoding, transmission, decoding, and specificity of calcium signals in plants.

Claudia Allan, Richard J Morris, Claudia-Nicole Meisrimler

Abstract readReview
In one paragraph

Review in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. CDPKs as CaJournal of plant research · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. Uncertainty minimization and pattern recognition inJournal of the Royal Society, Interface · 2025
    Article
  6. Article
  7. Article
  8. Identification ofFrontiers in plant science · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Calcium Signaling in Plant-Insect Interactions.Plants (Basel, Switzerland) · 2022
    Review
  14. Electrifying rhythms in plant cells.Current opinion in cell biology · 2022
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Claudia AllanUniversity of Canterbury, School of Biological Science, Christchurch, New Zealand.
Richard J MorrisComputational and Systems Biology, John Innes Centre, Norwich, UK.ORCID 0000-0003-3080-2613
Claudia-Nicole MeisrimlerUniversity of Canterbury, School of Biological Science, Christchurch, New Zealand.

Funding

Biotechnology and Biological Sciences Research Council BB/P012574/1Biotechnology and Biological Sciences Research Council BBS/E/J/00000611European Research Council 810131
6 · The paper itself

Abstract

Calcium acts as a signal and transmits information in all eukaryotes. Encoding machinery consisting of calcium channels, stores, buffers, and pumps can generate a variety of calcium transients in response to external stimuli, thus shaping the calcium signature. Mechanisms for the transmission of calcium signals have been described, and a large repertoire of calcium binding proteins exist that can decode calcium signatures into specific responses. Whilst straightforward as a concept, mysteries remain as to exactly how such information processing is biochemically implemented. Novel developments in imaging technology and genetically encoded sensors (such as calcium indicators), in particular for multi-signal detection, are delivering exciting new insights into intra- and intercellular calcium signaling. Here, we review recent advances in characterizing the encoding, transmission, and decoding mechanisms, with a focus on long-distance calcium signaling. We present technological advances and computational frameworks for studying the specificity of calcium signaling, highlight current gaps in our understanding and propose techniques and approaches for unravelling the underlying mechanisms.

Indexed as

CalciumCalcium SignalingCalcium-Binding ProteinsCalcium ChannelsPlantsCalciumCalcium-Binding ProteinsCalcium ChannelsCalcium signalinginformation theorylong-distance signalingmolecular communications

Identifiers

PMID35298633
PMCPMC9162177

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.