Evidence map›Paper›PMID 35298502›Full record

ArticlePloS one2022

COVID-19 Risk Stratification and Mortality Prediction in Hospitalized Indian Patients: Harnessing clinical data for public health benefits.

Shanmukh Alle, Akshay Kanakan, Samreen Siddiqui, Akshit Garg, Akshaya Karthikeyan, Priyanka Mehta, Neha Mishra, Partha Chattopadhyay, Priti Devi, Swati Waghdhare and 21 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 5 institutions in 1 country.

Shanmukh AlleCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, Telangana, India.
Akshay KanakanINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.ORCID 0000-0003-1878-9225
Samreen SiddiquiMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Akshit GargCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, Telangana, India.
Akshaya KarthikeyanCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, Telangana, India.
Priyanka MehtaINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Neha MishraINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Partha ChattopadhyayINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Priti DeviINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Swati WaghdhareMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Akansha TyagiMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Bansidhar TaraiMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Pranjal Pratim HazarikMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Poonam DasMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Sandeep BudhirajaMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Vivek NangiaMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Arun DewanMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Ramanathan SethuramanIndraprastha Institute of Information Technology Delhi, New Delhi, India.
C SubramanianIndraprastha Institute of Information Technology Delhi, New Delhi, India.
Mashrin SrivastavaIndraprastha Institute of Information Technology Delhi, New Delhi, India.
Avinash ChakravarthiIndraprastha Institute of Information Technology Delhi, New Delhi, India.
Johnny JacobIndraprastha Institute of Information Technology Delhi, New Delhi, India.
Madhuri NamagiriIndraprastha Institute of Information Technology Delhi, New Delhi, India.
Varma KonalaIndraprastha Institute of Information Technology Delhi, New Delhi, India.
Debasish DashINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Tavpritesh SethiAcademy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, India.
Sujeet JhaMax Super Speciality Hospital (A Unit of Devki Devi Foundation), Max Healthcare, Delhi, India.
Anurag AgrawalINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.
Rajesh PandeyINtegrative GENomics of HOst-PathogEn (INGEN-HOPE) laboratory, CSIR-Institute of Genomics and Integrative Biology (CSIR-IGIB), Delhi, India.ORCID 0000-0002-4404-8327
P K VinodCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, Telangana, India.
U Deva PriyakumarCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, Telangana, India.ORCID 0000-0001-7114-3955
Max Super Speciality Hospital · INInstitute of Genomics and Integrative Biology · INIndraprastha Institute of Information Technology Delhi · INInternational Institute of Information Technology, Hyderabad · INAcademy of Scientific and Innovative Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The variability of clinical course and prognosis of COVID-19 highlights the necessity of patient sub-group risk stratification based on clinical data. In this study, clinical data from a cohort of Indian COVID-19 hospitalized patients is used to develop risk stratification and mortality prediction models. We analyzed a set of 70 clinical parameters including physiological and hematological for developing machine learning models to identify biomarkers. We also compared the Indian and Wuhan cohort, and analyzed the role of steroids. A bootstrap averaged ensemble of Bayesian networks was also learned to construct an explainable model for discovering actionable influences on mortality and days to outcome. We discovered blood parameters, diabetes, co-morbidity and SpO2 levels as important risk stratification features, whereas mortality prediction is dependent only on blood parameters. XGboost and logistic regression model yielded the best performance on risk stratification and mortality prediction, respectively (AUC score 0.83, AUC score 0.92). Blood coagulation parameters (ferritin, D-Dimer and INR), immune and inflammation parameters IL6, LDH and Neutrophil (%) are common features for both risk and mortality prediction. Compared with Wuhan patients, Indian patients with extreme blood parameters indicated higher survival rate. Analyses of medications suggest that a higher proportion of survivors and mild patients who were administered steroids had extreme neutrophil and lymphocyte percentages. The ensemble averaged Bayesian network structure revealed serum ferritin to be the most important predictor for mortality and Vitamin D to influence severity independent of days to outcome. The findings are important for effective triage during strains on healthcare infrastructure.

Indexed as

AdolescentAdultAgedAged, 80 and overBayes TheoremChildChinaCOVID-19FemaleHospitalizationHumansIndiaMachine LearningMaleMiddle AgedModels, Statistical

Identifiers

PMID35298502
PMCPMC8929610
OpenAlexW4220668093

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.