Evidence map›Paper›PMID 35296941›Full record

ArticleJournal of digital imaging2022

Integrating Biological and Radiological Data in a Structured Repository: a Data Model Applied to the COSMOS Case Study.

Noemi Garau, Alessandro Orro, Paul Summers, Lorenza De Maria, Raffaella Bertolotti, Danny Bassis, Marta Minotti, Elvio De Fiori, Guido Baroni, Chiara Paganelli and 1 more

Abstract read
In one paragraph

Article in Journal of digital imaging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Noemi GarauDipartimento Di Elettronica, Informazione E Bioingegneria, Politecnico Di Milano, Milano, Italy. noemi.garau@polimi.it.ORCID 0000-0002-4827-3978
Alessandro OrroInstitute for Biomedical Technologies, National Research Council (ITB-CNR), Segrate, Italy.
Paul SummersDivision of Radiology, IEO, European Institute of Oncology IRCCS, Milan, Italy.
Lorenza De MariaDivision of Radiology, IEO, European Institute of Oncology IRCCS, Milan, Italy.
Raffaella BertolottiDivision of Data Management, IEO European Institute of Oncology IRCCS, Milan, Italy.
Danny BassisSchool of Medicine, University of Milan, Milan, Italy.
Marta MinottiDivision of Radiology, IEO, European Institute of Oncology IRCCS, Milan, Italy.
Elvio De FioriDivision of Radiology, IEO, European Institute of Oncology IRCCS, Milan, Italy.
Guido BaroniDipartimento Di Elettronica, Informazione E Bioingegneria, Politecnico Di Milano, Milano, Italy.
Chiara PaganelliDipartimento Di Elettronica, Informazione E Bioingegneria, Politecnico Di Milano, Milano, Italy.
Cristiano RampinelliDivision of Radiology, IEO, European Institute of Oncology IRCCS, Milan, Italy.

Funding

associazione italiana per la ricerca sul cancro IG2018 - 21701
6 · The paper itself

Abstract

Integrating the information coming from biological samples with digital data, such as medical images, has gained prominence with the advent of precision medicine. Research in this field faces an ever-increasing amount of data to manage and, as a consequence, the need to structure these data in a functional and standardized fashion to promote and facilitate cooperation among institutions. Inspired by the Minimum Information About BIobank data Sharing (MIABIS), we propose an extended data model which aims to standardize data collections where both biological and digital samples are involved. In the proposed model, strong emphasis is given to the cause-effect relationships among factors as these are frequently encountered in clinical workflows. To test the data model in a realistic context, we consider the Continuous Observation of SMOking Subjects (COSMOS) dataset as case study, consisting of 10 consecutive years of lung cancer screening and follow-up on more than 5000 subjects. The structure of the COSMOS database, implemented to facilitate the process of data retrieval, is therefore presented along with a description of data that we hope to share in a public repository for lung cancer screening research.

Indexed as

Early Detection of CancerLung NeoplasmsDatabases, FactualHumansInformation Storage and RetrievalSmokingLung cancer screeningRadiology workflowStandardizationStructured reporting

Identifiers

PMID35296941
PMCPMC9485502

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.