Evidence map›Paper›PMID 35294459›Full record

ArticlePloS one2022

Genomic analysis of virulence factors and antimicrobial resistance of group B Streptococcus isolated from pregnant women in northeastern Mexico.

Gerardo Del Carmen Palacios-Saucedo, Lydia Guadalupe Rivera-Morales, José Manuel Vázquez-Guillén, Amilcar Caballero-Trejo, Melissa Carolina Mellado-García, Aldo Sebastián Flores-Flores, José Alfredo González-Navarro, Celia Geovana Herrera-Rivera, Luis Ernesto Osuna-Rosales, Julio Antonio Hernández-González and 12 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 2 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 2 syntheses or guidelines pooled it, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 2 institutions in 2 countries.

Gerardo Del Carmen Palacios-SaucedoDivisión de Investigación en Salud y División de Auxiliares de Diagnóstico, Unidad Médica de Alta Especialidad Hospital de Especialidades No. 25, Instituto Mexicano del Seguro Social, Monterrey, Nuevo León, México.ORCID 0000-0002-8744-2025
Lydia Guadalupe Rivera-MoralesLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.ORCID 0000-0001-7329-0449
José Manuel Vázquez-GuillénLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Amilcar Caballero-TrejoDepartamento de Epidemiología y Dirección de Educación e Investigación, Unidad Médica de Alta Especialidad No. 23 Hospital de Ginecología y Obstetricia "Dr. Ignacio Morones Prieto", Instituto Mexicano del Seguro Social, Monterrey, Nuevo León, México.
Melissa Carolina Mellado-GarcíaLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Aldo Sebastián Flores-FloresLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
José Alfredo González-NavarroLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.ORCID 0000-0003-1662-9092
Celia Geovana Herrera-RiveraDirección General de Calidad y Educación en Salud, Secretaría de Salud, Alcaldía Miguel Hidalgo, Ciudad de México, México.ORCID 0000-0003-0467-8073
Luis Ernesto Osuna-RosalesUnidad de Genómica, Centro de Investigación y Desarrollo en Ciencias de la Salud, Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, México.
Julio Antonio Hernández-GonzálezLaboratorio de Genómica y Bioinformática, Centro de Investigaciones Biológicas del Noroeste, La Paz, Baja California Sur, México.
Ricardo Vázquez-JuárezLaboratorio de Genómica y Bioinformática, Centro de Investigaciones Biológicas del Noroeste, La Paz, Baja California Sur, México.
Carolina Barrón-EnríquezLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.ORCID 0000-0002-7024-6271
Ramón Valladares-TrujilloCoordinación de Educación e Investigación en Salud, Hospital General de Zona No. 17, Instituto Mexicano del Seguro Social, Monterrey, Nuevo León, México.ORCID 0000-0002-8247-8483
Joaquín Dario Treviño-BaezDepartamento de Epidemiología y Dirección de Educación e Investigación, Unidad Médica de Alta Especialidad No. 23 Hospital de Ginecología y Obstetricia "Dr. Ignacio Morones Prieto", Instituto Mexicano del Seguro Social, Monterrey, Nuevo León, México.ORCID 0000-0003-1465-4593
César Alejandro Alonso-TéllezDirección General de Calidad y Educación en Salud, Secretaría de Salud, Alcaldía Miguel Hidalgo, Ciudad de México, México.
Luis Daniel Ramírez-CalvilloDirección General de Calidad y Educación en Salud, Secretaría de Salud, Alcaldía Miguel Hidalgo, Ciudad de México, México.
Ricardo Martín Cerda-FloresFacultad de Enfermería, Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, México.
Rocío Ortiz-LópezUnidad de Genómica, Centro de Investigación y Desarrollo en Ciencias de la Salud, Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, México.
Miguel Ángel Rivera-AlvaradoDivisión de Investigación en Salud y División de Auxiliares de Diagnóstico, Unidad Médica de Alta Especialidad Hospital de Especialidades No. 25, Instituto Mexicano del Seguro Social, Monterrey, Nuevo León, México.
Fortino Solórzano-SantosHospital de Pediatría, Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Alcaldía Cuauhtémoc, Ciudad de México, México.
Jorge Castro-GarzaLaboratorio de Bioquímica y Genética de Microorganismos, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Cristina Rodríguez-PadillaLaboratorio de Inmunología y Virología, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Universidad Autónoma de Nuevo León · MXMexican Social Security Institute · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionGroup B Streptococcus (GBS) causes infections in women during pregnancy and puerperium and invasive infections in newborns. The genes lmb, cylE, scpB, and hvgA are involved with increased virulence of GBS, and hypervirulent clones have been identified in different regions. In addition, increasing resistance of GBS to macrolides and lincosamides has been reported, so knowing the patterns of antibiotic resistance may be necessary to prevent and treat GBS infections. This study aimed to identify virulence genes and antibiotic resistance associated with GBS colonization in pregnant women from northeastern Mexico.

methodsPregnant women with 35-37 weeks of gestation underwent recto-vaginal swabbing. One swab was inoculated into Todd-Hewitt broth supplemented with gentamicin and nalidixic acid, a second swab was inoculated into LIM enrichment broth, and a third swab was submerged into a transport medium. All samples were subcultured onto blood agar. After overnight incubation, suggestive colonies with or without hemolysis were analyzed to confirm GBS identification by Gram staining, catalase test, hippurate hydrolysis, CAMP test, and incubation in a chromogenic medium. We used latex agglutination to confirm and serotype GBS isolates. Antibiotic resistance patterns were assessed by Vitek 2 and disk diffusion. Periumbilical, rectal and nasopharyngeal swabs were collected from some newborns of colonized mothers. All colonized women and their newborns were followed up for three months to assess the development of disease attributable to GBS. Draft genomes of all GBS isolates were obtained by whole-genome sequencing. In addition, bioinformatic analysis to identify genes encoding capsular polysaccharides and virulence factors was performed using BRIG, while antibiotic resistance genes were identified using the CARD database.

resultsWe found 17 GBS colonized women out of 1154 pregnant women (1.47%). None of the six newborns sampled were colonized, and no complications due to GBS were detected in pregnant women or newborns. Three isolates were serotype I, 5 serotype II, 3 serotype III, 4 serotype IV, and 2 serotype V. Ten distinct virulence gene profiles were identified, being scpB, lmb, fbsA, acp, PI-1, PI-2a, cylE the most common (3/14, 21%). The virulence genes identified were scpB, lmb, cylE, PI-1, fbsA, PI-2a, acp, fbsB, PI-2b, and hvgA. We identified resistance to tetracycline in 65% (11/17) of the isolates, intermediate susceptibility to clindamycin in 41% (7/17), and reduced susceptibility to ampicillin in 23.5% (4/17). The tetM gene associated to tetracyclines resistance was found in 79% (11/14) and the mel and mefA genes associated to macrolides resistance in 7% (1/14).

conclusionsThe low prevalence of colonization and the non-occurrence of mother-to-child transmission suggest that the intentional search for GBS colonization in this population is not justified. Our results also suggest that risk factors should guide the use of intrapartum antibiotic prophylaxis. The detection of strains with genes coding virulence factors means that clones with pathogenic potential circulates in this region. On the other hand, the identification of decreased susceptibility to antibiotics from different antimicrobial categories shows the importance of adequately knowing the resistance patterns to prevent and to treat GBS perinatal infection.

Indexed as

Pregnancy Complications, InfectiousStreptococcal InfectionsAnti-Bacterial AgentsDrug Resistance, BacterialFemaleHumansInfant, NewbornInfectious Disease Transmission, VerticalMacrolidesMexicoMicrobial Sensitivity TestsPregnancyPregnant PeopleStreptococcus agalactiaeVaginaVirulence FactorsAnti-Bacterial AgentsMacrolidesVirulence Factors

Identifiers

PMID35294459
PMCPMC8926241
OpenAlexW4220995442

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.