Evidence map›Paper›PMID 35294223›Full record

ArticleJCO precision oncology2022

Changes in Triple-Negative Breast Cancer Molecular Subtypes in Patients Without Pathologic Complete Response After Neoadjuvant Systemic Chemotherapy.

Hiroko Masuda, Kenichi Harano, Sakiko Miura, Ying Wang, Yuko Hirota, Oi Harada, Mohit Kumar Jolly, Yuki Matsunaga, Bora Lim, Anita L Wood and 17 more

Open access · greenAbstract read
In one paragraph

Article in JCO precision oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 31 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. EMT and cancer: what clinicians should know.Nature reviews. Clinical oncology · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 9 institutions in 5 countries.

Hiroko MasudaDepartment of Breast Surgical Oncology, Showa University, Tokyo, Japan.ORCID 0000-0002-4306-1298
Kenichi HaranoDepartment of Medical Oncology, National Cancer Center Hospital East, Kashiwa, Japan.
Sakiko MiuraDepartment of Pathology, Showa University, Tokyo, Japan.
Ying WangDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX.
Yuko HirotaDepartment of Pathology, Showa University, Tokyo, Japan.
Oi HaradaDepartment of Breast Surgical Oncology, Showa University, Tokyo, Japan.
Mohit Kumar JollyCentre for BioSystems Science and Engineering, Indian Institute of Science, Bangalore, India.
Yuki MatsunagaDepartment of Breast Surgical Oncology, Showa University, Tokyo, Japan.
Bora LimMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-4182-6058
Anita L WoodMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.
Napa ParinyanitikulDivision of Medical Oncology, Department of Medicine, Faculty of Medicine, Chulalongkorn University and King Chulalongkorn Memorial Hospital, Bangkok, Thailand.
Hee Jin LeeDepartment of Pathology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Gyungyub GongDepartment of Pathology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, South Korea.
Jason T GeorgeCenter for Theoretical Biological Physics, Rice University, Houston, TX.ORCID 0000-0002-8248-2888
Herbert LevineDepartments of Bioengineering and Physics, Northeastern University, Boston, MA.ORCID 0000-0002-8819-9055
Jangsoon LeeMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.
Xiaoping WangMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.
Anthony LucciMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.
Arvind RaoDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-9613-426X
Brock L SchweitzerOncocyte Corporation (formerly Insight Genetics), Nashville, TN.ORCID 0000-0003-0178-5594
O Rayne LawrenceOncocyte Corporation (formerly Insight Genetics), Nashville, TN.
Robert S SeitzOncocyte Corporation (formerly Insight Genetics), Nashville, TN.ORCID 0000-0002-5806-2840
Stephan W MorrisOncocyte Corporation (formerly Insight Genetics), Nashville, TN.
David R HoutOncocyte Corporation (formerly Insight Genetics), Nashville, TN.
Seigo NakamuraDepartment of Breast Surgical Oncology, Showa University, Tokyo, Japan.ORCID 0000-0001-6597-9107
Savitri KrishnamurthyMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.
Naoto T UenoMorgan Welch Inflammatory Breast Cancer Research Program and Clinic, The University of Texas MD Anderson Cancer Center, Houston, TX.
The University of Texas MD Anderson Cancer Center · USShowa University · JPInsight Genetics (United States) · USUlsan College · KRCenter for Theoretical Biological Physics · USChulalongkorn University · THIndian Institute of Science Bangalore · INNational Cancer Center Hospital East · JPNortheastern University · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Enhancing anti-EGFR Therapeutic Efficacy in Inflammatory Breast CancerR01CA205043 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI UENO, NAOTO T. · 2017 to 2021
$1.8M
Markers of sensivity to the EGFR inhibitor erlotinib in breast cancerR01CA123318 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI UENO, NAOTO T. · 2007 to 2012
$1.4M
NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA123318NCI NIH HHS R01 CA205043
6 · The paper itself

Abstract

purposeLehmann et al have identified four molecular subtypes of triple-negative breast cancer (TNBC)-basal-like (BL) 1, BL2, mesenchymal (M), and luminal androgen receptor-and an immunomodulatory (IM) gene expression signature modifier. Our group previously showed that the response of TNBC to neoadjuvant systemic chemotherapy (NST) differs by molecular subtype, but whether NST affects the subtype was unknown. Here, we tested the hypothesis that in patients without pathologic complete response, TNBC subtypes can change after NST. Moreover, in cases with the changed subtype, we determined whether epithelial-to-mesenchymal transition (EMT) had occurred. MATERIALS AND

methodsFrom the Pan-Pacific TNBC Consortium data set containing TNBC patient samples from four countries, we examined 64 formalin-fixed, paraffin-embedded pairs of matched pre- and post-NST tumor samples. The TNBC subtype was determined using the TNBCtype-IM assay. We analyzed a partial EMT gene expression scoring metric using mRNA data.

resultsOf the 64 matched pairs, 36 (56%) showed a change in the TNBC subtype after NST. The most frequent change was from BL1 to M subtypes (38%). No tumors changed from M to BL1. The IM signature was positive in 14 (22%) patients before NST and eight (12.5%) patients after NST. The EMT score increased after NST in 28 (78%) of the 36 patients with the changed subtype (

conclusionWe report, to our knowledge, for the first time that the TNBC molecular subtype and IM signature frequently change after NST. Our results also suggest that EMT is promoted by NST. Our findings may lead to innovative adjuvant therapy strategies in TNBC cases with residual tumor after NST.

Indexed as

Triple Negative Breast NeoplasmsGene Expression ProfilingHumansImmunotherapyNeoadjuvant TherapyTranscriptome

Identifiers

PMID35294223
PMCPMC8939918
OpenAlexW4220833018

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.