Evidence map›Paper›PMID 35290545›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2022

Impact of phosphate concentration on the metabolome of biofilms of the marine bacterium Pseudoalteromonas lipolytica.

Nathan Carriot, Raphaëlle Barry-Martinet, Jean-François Briand, Annick Ortalo-Magné, Gérald Culioli

Abstract read
PubMed Publisher
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Effects of nitrate limitation on the metabolome ofCurrent research in microbial sciences · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Nathan CarriotLaboratoire MAPIEM, Université de Toulon, EA 4323, La Garde, France.ORCID http://orcid.org/0000-0001-8732-2755
Raphaëlle Barry-MartinetLaboratoire MAPIEM, Université de Toulon, EA 4323, La Garde, France.ORCID http://orcid.org/0000-0002-9147-7503
Jean-François BriandLaboratoire MAPIEM, Université de Toulon, EA 4323, La Garde, France.ORCID http://orcid.org/0000-0001-8729-2621
Annick Ortalo-MagnéLaboratoire MAPIEM, Université de Toulon, EA 4323, La Garde, France. annick.ortalo-magne@univ-tln.fr.ORCID http://orcid.org/0000-0001-8899-3067
Gérald CulioliLaboratoire MAPIEM, Université de Toulon, EA 4323, La Garde, France. gerald.culioli@univ-avignon.fr.ORCID http://orcid.org/0000-0001-5760-6394
Université de Toulon · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionMarine biofilms are the most widely distributed mode of life on Earth and drive biogeochemical cycling processes of most elements. Phosphorus (P) is essential for many biological processes such as energy transfer mechanisms, biological information storage and membrane integrity.

objectivesOur aim was to analyze the effect of a gradient of ecologically relevant phosphate concentrations on the biofilm-forming capacity and the metabolome of the marine bacterium Pseudoalteromonas lipolytica TC8.

methodsIn addition to the evaluation of the effect of different phosphate concentration on the biomass, structure and gross biochemical composition of biofilms of P. lipolytica TC8, untargeted metabolomics based on liquid chromatography-mass spectrometry (LC-MS) analysis was used to determine the main metabolites impacted by P-limiting conditions. Annotation of the most discriminating and statistically robust metabolites was performed through the concomitant use of molecular networking and MS/MS fragmentation pattern interpretation.

resultsAt the lowest phosphate concentration, biomass, carbohydrate content and three-dimensional structures of biofilms tended to decrease. Furthermore, untargeted metabolomics allowed for the discrimination of the biofilm samples obtained at the five phosphate concentrations and the highlighting of a panel of metabolites mainly implied in such a discrimination. A large part of the metabolites of the resulting dataset were then putatively annotated. Ornithine lipids were found in increasing quantity when the phosphate concentration decreased, while the opposite trend was observed for oxidized phosphatidylethanolamines (PEs).

conclusionThis study demonstrated the suitability of LC-MS-based untargeted metabolomics for evaluating the effect of culture conditions on marine bacterial biofilms. More precisely, these results supported the high plasticity of the membrane of P. lipolytica TC8, while the role of the oxidized PEs remains to be clarified.

Indexed as

MetabolomicsPseudoalteromonasBiofilmsMetabolomePhosphatesTandem Mass SpectrometryPhosphatesLC-MS-based metabolomicsMarine biofilmsMembrane remodelingOrnithine lipidsPhosphate depletion

Identifiers

PMID35290545
OpenAlexW4220989738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.