Evidence map›Paper›PMID 35289093›Full record

ArticleMolecular genetics & genomic medicine2022

The clinical utility of a risk-modifying SNP to detect carriers for spinal muscular atrophy with increased sensitivity.

Gardenier Ware, Cecelia Miller, Dan Jones, Matthew Avenarius

Abstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Gardenier WareJames Molecular Laboratory, The Ohio State University James Cancer Center, Columbus, Ohio, USA.
Cecelia MillerJames Molecular Laboratory, The Ohio State University James Cancer Center, Columbus, Ohio, USA.
Dan JonesJames Molecular Laboratory, The Ohio State University James Cancer Center, Columbus, Ohio, USA.
Matthew AvenariusJames Molecular Laboratory, The Ohio State University James Cancer Center, Columbus, Ohio, USA.ORCID 0000-0001-9516-5163

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSpinal muscular atrophy (SMA) is an autosomal recessive motor neuron disease caused by biallelic inactivation of the survival motor neuron 1 (SMN1) gene. With a prevalence of ~1 in 11,000 live births (carrier frequency of ~1:50), SMA is one of the most common severe childhood-onset diseases; therefore, current guidelines recommend pan-ethnic carrier screening for SMA before or during pregnancy. Routine SMN1 copy number assessment detects ~96% of all SMA carriers, but not the remaining 4% who harbor two copies of SMN1 arrayed in -cis [2 + 0]. The c.*3+80T>G risk-modifying SNP positively correlates with this chromosomal configuration and may be used to modify the residual risk of being a carrier for SMA.

methodsOne year after incorporating the detection of the c.*3+80>G risk-modifying SNP into our routine SMA carrier screen, we perform a retrospective chart review to evaluate its frequency and utilization in the prenatal clinic.

resultsIn comparison with classic carriers for SMA, study data show that individuals with two copies of SMN1 and the risk modifier were counseled less frequently about their increased risk of being a carrier for SMA.

conclusionIncorporating the c.*3+80T>G risk-modifying SNP is important for detecting carriers for SMA with a higher clinical sensitivity.

Indexed as

Genetic CounselingMuscular Atrophy, SpinalChildFemaleGenetic Carrier ScreeningHumansInheritance PatternsPregnancyRetrospective StudiesSurvival of Motor Neuron 1 ProteinSurvival of Motor Neuron 1 Proteincarrier testingclinical diagnosticsgenetic counselingpopulation screeningrisk-modifying SNPspinal muscular atrophy

Identifiers

PMID35289093
PMCPMC9000938

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.