Evidence map›Paper›PMID 35288718›Full record

ReviewNature protocols2022

CRISPR somatic genome engineering and cancer modeling in the mouse pancreas and liver.

Thorsten Kaltenbacher, Jessica Löprich, Roman Maresch, Julia Weber, Sebastian Müller, Rupert Oellinger, Nina Groß, Joscha Griger, Niklas de Andrade Krätzig, Petros Avramopoulos and 16 more

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature protocols, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Rat Models of Breast Cancer.Advances in experimental medicine and biology · 2025
    Review
  6. Review
  7. Review
  8. Review
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  10. Article
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  14. Animal models for COVID-19: advances, gaps and perspectives.Signal transduction and targeted therapy · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 5 institutions in 2 countries.

Thorsten Kaltenbacher *Institute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0001-8233-4749
Jessica Löprich *Institute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0001-9337-9539
Roman MareschInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0003-3393-8882
Julia WeberInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.
Sebastian MüllerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.
Rupert OellingerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.
Nina GroßInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.
Joscha GrigerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.
Niklas de Andrade KrätzigInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0003-2141-6745
Petros AvramopoulosInstitute of Pharmacology and Toxicology, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0001-6494-9432
Deepak RamanujamInstitute of Pharmacology and Toxicology, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0003-4854-6355
Sabine BrummerInstitute of Pharmacology and Toxicology, Technical University of Munich, Munich, Germany.
Sebastian A WidholzInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0002-4566-2986
Stefanie BärthelCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0001-5986-4864
Chiara FalcomatàCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.
Anja PfausInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0002-7145-2544
Ahmed AlnatshaDepartment of Medicine II, University Hospital, LMU Munich, Munich, Germany.
Julia MayerleDepartment of Medicine II, University Hospital, LMU Munich, Munich, Germany.
Marc Schmidt-SupprianCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.
Maximilian ReichertDepartment of Medicine II, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.
Günter SchneiderDepartment of Medicine II, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0003-1840-4508
Ursula EhmerDepartment of Medicine II, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0002-0441-1953
Christian J BraunInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0003-1704-6219
Dieter SaurCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0001-5874-0210
Stefan EngelhardtInstitute of Pharmacology and Toxicology, Technical University of Munich, Munich, Germany.
Roland RadInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technical University of Munich, Munich, Germany. roland.rad@tum.de.ORCID http://orcid.org/0000-0002-6849-9659
Technical University of Munich · DEGerman Cancer Research Center · DEGerman Centre for Cardiovascular Research · DETUM Klinikum · DELMU Klinikum · DE

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) DFG RA 1629/2-1Deutsche Forschungsgemeinschaft (German Research Foundation) SA1374/4-2Deutsche Krebshilfe (German Cancer Aid) 70114314
6 · The paper itself

Abstract

Genetically engineered mouse models (GEMMs) transformed the study of organismal disease phenotypes but are limited by their lengthy generation in embryonic stem cells. Here, we describe methods for rapid and scalable genome engineering in somatic cells of the liver and pancreas through delivery of CRISPR components into living mice. We introduce the spectrum of genetic tools, delineate viral and nonviral CRISPR delivery strategies and describe a series of applications, ranging from gene editing and cancer modeling to chromosome engineering or CRISPR multiplexing and its spatio-temporal control. Beyond experimental design and execution, the protocol describes quantification of genetic and functional editing outcomes, including sequencing approaches, data analysis and interpretation. Compared to traditional knockout mice, somatic GEMMs face an increased risk for mouse-to-mouse variability because of the higher experimental demands of the procedures. The robust protocols described here will help unleash the full potential of somatic genome manipulation. Depending on the delivery method and envisaged application, the protocol takes 3-5 weeks.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsNeoplasmsAnimalsCRISPR-Cas SystemsGene EditingLiverMiceMice, KnockoutPancreas

Identifiers

PMID35288718
OpenAlexW4220870477

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.