Evidence map›Paper›PMID 35286640›Full record

ReviewAnalytical sciences : the international journal of the Japan Society for Analytical Chemistry2022

A review of microscopic cell imaging and neural network recognition for synergistic cyanobacteria identification and enumeration.

Liam Vaughan, Arash Zamyadi, Suraj Ajjampur, Husein Almutaram, Stefano Freguia

Abstract readReview
In one paragraph

Review in Analytical sciences : the international journal of the Japan Society for Analytical Chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Unlocking the potential of bioanalytical data through machine learning.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Liam VaughanWater Research Australia, Level 2, 250 Victoria Square, Adelaide, SA, 5000, Australia. vaughan1@student.unimelb.edu.au.
Arash ZamyadiWater Research Australia, Level 2, 250 Victoria Square, Adelaide, SA, 5000, Australia.
Suraj AjjampurWater Research Australia, Level 2, 250 Victoria Square, Adelaide, SA, 5000, Australia.
Husein AlmutaramDepartment of Civil and Mineral Engineering, University of Toronto, Toronto, ON, M5S 1A4, Canada.
Stefano FreguiaDepartment of Chemical Engineering, The University of Melbourne, Parkville, VIC, 3010, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Real-time cyanobacteria/algal monitoring is a valuable tool for early detection of harmful algal blooms, water treatment efficacy evaluation, and assists tailored water quality risk assessments by considering taxonomy and cell counts. This review evaluates and proposes a synergistic approach using neural network image recognition and microscopic imaging devices by first evaluating published literature for both imaging microscopes and image recognition. Quantitative phase imaging was considered the most promising of the investigated imaging techniques due to the provision of enhanced information relative to alternatives. This information provides significant value to image recognition neural networks, such as the convolutional neural networks discussed within this review. Considering published literature, a cyanobacteria monitoring system and corresponding image processing workflow using in situ sample collection buoys and on-shore sample processing was proposed. This system can be implemented using commercially available equipment to facilitate accurate, real-time water quality monitoring.

Indexed as

CyanobacteriaHarmful Algal BloomNeural Networks, ComputerWater QualityCell recognitionCyanobacteriaCytometryImaging microscopyMachine learningQuantitative phase imagingWorkflow

Identifiers

PMID35286640
PMCPMC8938360

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.