Evidence map›Paper›PMID 35286334›Full record

Observational studyPloS one2022

Surveillance of SARS-CoV-2 virus circulation using Acute Respiratory Infections sentinel system of Catalonia (PIDIRAC) during the 2019-2020 season: A retrospective observational study.

Mireia Jané, Ana Martínez, Pilar Ciruela, Mar Mosquera, Miguel J Martínez, Luca Basile, Mª José Vidal, Mª Mercè Nogueras, Patricia de Molina, Jordi Vila and 1 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Observational
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Mireia JanéPublic Health Agency of Catalonia (ASPCAT), Barcelona, Spain.ORCID 0000-0002-1302-6723
Ana MartínezPublic Health Agency of Catalonia (ASPCAT), Barcelona, Spain.
Pilar CiruelaPublic Health Agency of Catalonia (ASPCAT), Barcelona, Spain.
Mar MosqueraMicrobiology Laboratory, Hospital Clinic-ISGlobal, University of Barcelona, Barcelona, Spain.ORCID 0000-0001-5863-7424
Miguel J MartínezMicrobiology Laboratory, Hospital Clinic-ISGlobal, University of Barcelona, Barcelona, Spain.
Luca BasilePublic Health Agency of Catalonia (ASPCAT), Barcelona, Spain.
Mª José VidalPublic Health Agency of Catalonia (ASPCAT), Barcelona, Spain.
Mª Mercè NoguerasPublic Health Agency of Catalonia (ASPCAT), Barcelona, Spain.
Patricia de MolinaMicrobiology Laboratory, Hospital Clinic-ISGlobal, University of Barcelona, Barcelona, Spain.
Jordi VilaMicrobiology Laboratory, Hospital Clinic-ISGlobal, University of Barcelona, Barcelona, Spain.
Mª Angeles MarcosMicrobiology Laboratory, Hospital Clinic-ISGlobal, University of Barcelona, Barcelona, Spain.
Barcelona Institute for Global Health · ESAgència de Salut Pública de Catalunya · ESInstituto de Salud Carlos III · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn the context of COVID-19 pandemic in Catalonia (Spain), the present study analyses respiratory samples collected by the primary care network using Acute Respiratory Infections Sentinel Surveillance System (PIDIRAC) during the 2019-2020 season to complement the pandemic surveillance system in place to detect SARS-CoV-2. The aim of the study is to describe whether SARS-CoV-2 was circulating before the first confirmed case was detected in Catalonia, on February 25th, 2020.

methodsThe study sample was made up of all samples collected by the PIDIRAC primary care network as part of the Influenza and Acute Respiratory Infections (ARI) surveillance system activities. The study on respiratory virus included coronavirus using multiple RT-PCR assays. All positive samples for human coronavirus were subsequently typed for HKU1, OC43, NL63, 229E. Every respiratory sample was frozen at-80°C and retrospectively studied for SARS-CoV-2 detection. A descriptive study was performed, analysing significant differences among variables related to SARS-CoV- 2 cases comparing with rest of coronaviruses cases through a bivariate study with Chi-squared test and statistical significance at 95%.

resultsBetween October 2019 and April 2020, 878 respiratory samples from patients with acute respiratory infection or influenza syndrome obtained by PIDIRAC were analysed. 51.9% tested positive for influenza virus, 48.1% for other respiratory viruses. SARS-CoV-2 was present in 6 samples. The first positive SARS-CoV-2 case had symptom onset on 2 March 2020. These 6 cases were 3 men and 3 women, aged between 25 and 50 years old. 67% had risk factors, none had previous travel history nor presented viral coinfection. All of them recovered favourably.

conclusionSentinel Surveillance PIDIRAC enhances global epidemiological surveillance by allowing confirmation of viral circulation and describes the epidemiology of generalized community respiratory viruses' transmission in Catalonia. The system can provide an alert signal when identification of a virus is not achieved in order to take adequate preparedness measures.

Indexed as

AdolescentAdultAgedAged, 80 and overChildChild, PreschoolCoronavirusCOVID-19FemaleHumansInfantMaleMiddle AgedOrthomyxoviridaePrimary Health CareRespiratory Tract InfectionsRNA, Viral

Identifiers

PMID35286334
PMCPMC8920273
OpenAlexW4221019710

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.