Evidence map›Paper›PMID 35286314›Full record

ArticlePloS one2022

Exploring the ovine sperm transcriptome by RNAseq techniques. I Effect of seasonal conditions on transcripts abundance.

Irene Ureña, Carmen González, Manuel Ramón, Marta Gòdia, Alex Clop, Jorge H Calvo, Mª Jesús Carabaño, Magdalena Serrano

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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  10. Expression ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Irene UreñaDepartamento de Mejora Genética Animal, CSIC-INIA, Madrid, Spain.
Carmen GonzálezDepartamento de Mejora Genética Animal, CSIC-INIA, Madrid, Spain.
Manuel RamónIRIAF-CERSYRA, Valdepeñas, Ciudad Real, Spain.
Marta GòdiaAnimal Genomics Group, Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Catalonia, Spain.
Alex ClopAnimal Genomics Group, Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Catalonia, Spain.
Jorge H CalvoUnidad de Tecnología en Producción Animal, CITA, Zaragoza, Spain.
Mª Jesús CarabañoDepartamento de Mejora Genética Animal, CSIC-INIA, Madrid, Spain.
Magdalena SerranoDepartamento de Mejora Genética Animal, CSIC-INIA, Madrid, Spain.ORCID 0000-0002-1621-3102
Consejo Superior de Investigaciones Científicas · ESCenter for Research in Agricultural Genomics · ESCentro de Investigación y Tecnología Agroalimentaria de Aragón · ESCentro Regional de Selección y Reproducción Animal · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the cell molecular changes occurring as a results of climatic circumstances is crucial in the current days in which climate change and global warming are one of the most serious challenges that living organisms have to face. Sperm are one of the mammals' cells most sensitive to heat, therefore evaluating the impact of seasonal changes in terms of its transcriptional activity can contribute to elucidate how these cells cope with heat stress events. We sequenced the total sperm RNA from 64 ejaculates, 28 collected in summer and 36 collected in autumn, from 40 Manchega rams. A highly rich transcriptome (11,896 different transcripts) with 90 protein coding genes that exceed an average number of 5000 counts were found. Comparing transcriptome in the summer and autumn ejaculates, 236 significant differential abundance genes were assessed, most of them (228) downregulated. The main functions that these genes are related to sexual reproduction and negative regulation of protein metabolic processes and kinase activity. Sperm response to heat stress supposes a drastic decrease of the transcriptional activity, and the upregulation of only a few genes related with the basic functions to maintain the organisms' homeostasis and surviving. Rams' spermatozoids carry remnant mRNAs which are retrospectively indicators of events occurring along the spermatogenesis process, including abiotic factors such as environmental temperature.

Indexed as

SpermatozoaTranscriptomeAnimalsMaleRetrospective StudiesSeasonsSheepSheep, DomesticSpermatogenesis

Identifiers

PMID35286314
PMCPMC8920283
OpenAlexW4221134966

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.