Evidence map›Paper›PMID 35285711›Full record

ArticleApplied and environmental microbiology2022

Mosaic Evolution of Beta-Barrel-Porin-Encoding Genes in

Xiongbin Chen, Xuxia Cai, Zewei Chen, Jinjin Wu, Gaofeng Hao, Quan Luo, Shuhong Liu, Junya Zhang, Yueming Hu, Guoqiang Zhu and 4 more

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Experimental evolution ofMicrobiology spectrum · 2025
    Article
  3. Article
  4. Microbial membrane transport proteins and their biotechnological applications.World journal of microbiology & biotechnology · 2024
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Xiongbin Chen *Youth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Xuxia Cai *Youth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Zewei Chen *Youth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Jinjin WuYouth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Gaofeng HaoDepartment of Stomatology, Shenzhen Maternal and Child Health Care Hospital Affiliated to Southern Medical University, Shenzhen, China.
Quan LuoDepartment of Stomatology, Shenzhen Maternal and Child Health Care Hospital Affiliated to Southern Medical University, Shenzhen, China.
Shuhong LiuYouth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Junya ZhangYouth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Yueming HuYouth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.
Guoqiang ZhuCollege of Veterinary Medicine, Yangzhou Universitygrid.268415.c, Yangzhou, China.
Wolfgang KoesterVaccine and Infectious Disease Organization-International Vaccine Centre, Saskatoon, Saskatchewan, Canada.
Aaron P WhiteVaccine and Infectious Disease Organization-International Vaccine Centre, Saskatoon, Saskatchewan, Canada.ORCID 0000-0003-2746-5265
Yi CaiDepartment of Medical Microbiology, School of Basic Medicine, Shenzhen University Health Science Center, Shenzhen, China.
Yejun WangYouth Innovation Team of Medical Bioinformatics, Shenzhen University Health Science Center, Shenzhen, China.ORCID 0000-0003-4030-0027
Shenzhen University Health Science Center · CNShenzhen Maternity and Child Healthcare Hospital · CNYangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial porin-encoding genes are often found under positive selection. Local recombination has also been identified in a few of them to facilitate bacterial rapid adaptation, although it remains unknown whether it is a common evolutionary mechanism for the porins or outer membrane proteins in Gram-negative bacteria. In this study, we investigated the beta-barrel (β-barrel) porin-encoding genes in Escherichia coli that were reported under positive Darwinian selection. Besides

Indexed as

Escherichia coliPorinsAnimalsAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacterial ProteinsHumansSheepAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacterial ProteinsPorinsEscherichia coliFhuALamBlocal recombinationmosaic evolutionOmpAOmpCOmpFβ-barrel porin

Identifiers

PMID35285711
PMCPMC9004372
OpenAlexW4221099333

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.