Evidence map›Paper›PMID 35285580›Full record

ArticleThe journal of pathology. Clinical research2022

Genome-wide analysis of mRNA and microRNA expression in colorectal cancer and adjacent normal mucosa.

Yuma Ito, Mitsumasa Osakabe, Takeshi Niinuma, Noriyuki Uesugi, Ryo Sugimoto, Naoki Yanagawa, Koki Otsuka, Akira Sasaki, Takayuki Matsumoto, Hiromu Suzuki and 1 more

Open access · goldAbstract read
In one paragraph

Article in The journal of pathology. Clinical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 56% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yuma ItoDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba, Japan.
Mitsumasa Osakabe *Department of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba, Japan.
Takeshi NiinumaDepartment of Molecular Biology, School of Medicine, Sapporo Medical University, Sapporo, Japan.
Noriyuki UesugiDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba, Japan.
Ryo SugimotoDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba, Japan.
Naoki YanagawaDepartment of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba, Japan.
Koki OtsukaDepartment of Surgery, School of Medicine, Iwate Medical University, Yahaba, Japan.
Akira SasakiDepartment of Surgery, School of Medicine, Iwate Medical University, Yahaba, Japan.
Takayuki MatsumotoDivision of Gastroenterology, Department of Internal Medicine, Iwate Medical University, Yahaba, Japan.
Hiromu SuzukiDepartment of Molecular Biology, School of Medicine, Sapporo Medical University, Sapporo, Japan.ORCID 0000-0001-9635-3238
Tamotsu Sugai *Department of Molecular Diagnostic Pathology, School of Medicine, Iwate Medical University, Yahaba, Japan.ORCID 0000-0002-4896-3557
Iwate Medical University · JPSapporo Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

mRNA expression varies in human cancers. Such altered mRNA expression is negatively regulated by the expression of microRNAs (miRNAs), which play an important role in human tumorigenesis. According to this theory, inverse mRNA/miRNA expression may be a direct driver of cancer development, and certain genetic events may occur prior to the development of any discernible histological abnormalities. We examined the inverse expression between mRNAs and their corresponding miRNAs in colorectal cancer (CRC) and adjacent normal mucosa and performed pathway analysis to identify mRNA/miRNA networks. The cancer samples were divided into first (20 cases) and second (24 cases) cohorts, and 48 samples were obtained from two sections of the normal mucosa adjacent to the tumors from the second cohort. We investigated mRNAs with commonly altered expression in CRC and adjacent normal mucosa using isolated cancer glands and normal crypts from the first cohort, compared with that of distal normal crypts, using an array-based method. As a result, significant inverse correlations between CEACAM1 and miRNA-7114-5p and between AK1 and miRNA-6780-5p were found in CRC and adjacent normal mucosa. We validated these correlations in the second cohort using RT-PCR. To confirm these findings, transfection and immunohistochemical assays were also performed, which verified the inverse correlation between CEACAM1 and miRNA-7114-5p. Our findings suggest that the inverse correlations between the CEACAM1/miRNA-7114-5p and possibly AK1/miRNA-6780-5p pairs play an important role in early CRC development, and may help identify potential molecular targets for early detection of CRC.

Indexed as

Colorectal NeoplasmsMicroRNAsGene Expression Regulation, NeoplasticHumansMucous MembraneRNA, MessengerTranscription FactorsMicroRNAsRNA, MessengerTranscription Factorsadjacent normal mucosaarray-based analysiscolorectal cancermicroRNAmRNA

Identifiers

PMID35285580
PMCPMC9161315
OpenAlexW4220823076

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.