Evidence map›Paper›PMID 35284839›Full record

ArticleSTAR protocols2022

Protocol to assess the impact of early-life antibiotic exposure on murine longevity.

Miriam A Lynn, Feargal J Ryan, Yee C Tee, Saoirse C Benson, David J Lynn

Abstract read
In one paragraph

Article in STAR protocols, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Miriam A LynnPrecision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA 5001, Australia.
Feargal J RyanPrecision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA 5001, Australia.
Yee C TeePrecision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA 5001, Australia.
Saoirse C BensonPrecision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA 5001, Australia.
David J LynnPrecision Medicine Theme, South Australian Health and Medical Research Institute, Adelaide, SA 5001, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present this protocol using a mouse model to assess the impact of early-life antibiotic exposure on mammalian lifespan and the composition of the gut microbiota over time. We describe longitudinal fecal sampling and health monitoring following early-life antibiotic exposure. We detail DNA extraction and 16S rRNA gene sequencing to longitudinally profile the composition of the fecal microbiota. Finally, we discuss how to address potential confounders such as the stochastic recolonization of the gut microbiota following antibiotic exposure. For complete details on the use and execution of this protocol, please refer to Lynn et al. (2021).

Indexed as

Anti-Bacterial AgentsGastrointestinal MicrobiomeAnimalsFecesLongevityMammalsMiceRNA, Ribosomal, 16SAnti-Bacterial AgentsRNA, Ribosomal, 16SImmunologyMetabolismMicrobiologyModel OrganismsMolecular BiologySequencing

Identifiers

PMID35284839
PMCPMC8904607

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.