Evidence map›Paper›PMID 35281453›Full record

ReviewFrontiers in cellular and infection microbiology2022

KAP1/TRIM28: Transcriptional Activator and/or Repressor of Viral and Cellular Programs?

Keyera Randolph, Usman Hyder, Iván D'Orso

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in cellular and infection microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
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  8. Aberrant Expression of Human Endogenous Retroviruses andInternational journal of molecular sciences · 2026
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  15. Derepression of transposable elements in the mouse prefrontal cortex disrupts social behavior.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Keyera RandolphDepartment of Microbiology, The University of Texas Southwestern Medical Center, Dallas, TX, United States.
Usman HyderDepartment of Microbiology, The University of Texas Southwestern Medical Center, Dallas, TX, United States.
Iván D'OrsoDepartment of Microbiology, The University of Texas Southwestern Medical Center, Dallas, TX, United States.
The University of Texas Southwestern Medical Center · US

Funding

MOLECULAR MICROBIOLOGY TRAINING GRANTT32AI007520 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Julie K Pfeiffer · 1997 to 2026
$7.0M
Transcriptional regulatory mechanisms shaping HIV proviral fateR01AI114362 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI D'ORSO, IVAN · 2015 to 2024
$4.6M
Transcriptional regulatory mechanisms shaping HIV proviral fateR37AI114362 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Ivan D'Orso · 2025 to 2026
$1.0M
EXPERIMENTAL PARASITOLOGY &VECTOR BIOLOGYT32AI007030 · NIAID · UNIVERSITY OF NOTRE DAME · PI COLLINS, FRANK H. · 1985 to 2004
$588k
Exploiting Oncogenic Chromatin Regulators in Cancer Initiation and ProgressionK00CA264296 · NCI · UNIVERSITY OF COLORADO DENVER · PI Usman Hyder · 2024 to 2026
$295k
Delineating the Role of KAP1 in WNT-induced Colorectal CancerR03CA259672 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI D'ORSO, IVAN · 2022 to 2023
$164k
Exploiting Oncogenic Chromatin Regulators in Cancer Initiation and ProgressionF99CA264296 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HYDER, USMAN · 2021 to 2022
$72k
NCI NIH HHS F99 CA264296NCI NIH HHS K00 CA264296NCI NIH HHS R03 CA259672NIAID NIH HHS R01 AI114362NIAID NIH HHS R37 AI114362NIAID NIH HHS T32 AI007030NIAID NIH HHS T32 AI007520
6 · The paper itself

Abstract

Several transcriptional and epigenetic regulators have been functionally linked to the control of viral and cellular gene expression programs. One such regulator is Krüppel-associated box (KRAB)-associated protein 1 (KAP1: also named TRIM28 or TIF1β), which has been extensively studied in the past three decades. Here we offer an up-to date review of its various functions in a diversity of contexts. We first summarize the discovery of KAP1 repression of endogenous retroviruses during development. We then deliberate evidence in the literature suggesting KAP1 is both an activator and repressor of HIV-1 transcription and discuss experimental differences and limitations of previous studies. Finally, we discuss KAP1 regulation of DNA and RNA viruses, and then expand on KAP1 control of cellular responses and immune functions. While KAP1 positive and negative regulation of viral and cellular transcriptional programs is vastly documented, our mechanistic understanding remains narrow. We thus propose that precision genetic tools to reveal direct KAP1 functions in gene regulation will be required to not only illuminate new biology but also provide the foundation to translate the basic discoveries from the bench to the clinics.

Indexed as

Repressor ProteinsTranscription FactorsCell LineGene Expression RegulationTripartite Motif-Containing Protein 28Repressor ProteinsTranscription FactorsTripartite Motif-Containing Protein 28epigenetic silencingHIV-1KAP1transcriptional regulationTrim28

Identifiers

PMID35281453
PMCPMC8904932
OpenAlexW4213147843

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.