Evidence map›Paper›PMID 35281055›Full record

ArticleFrontiers in immunology2022

The Clinical Prediction Value of the Ubiquitination Model Reflecting the Immune Traits in LUAD.

Yinggang Che, Dongbo Jiang, Leidi Xu, Yuanjie Sun, Yingtong Wu, Yang Liu, Ning Chang, Jiangjiang Fan, Hangtian Xi, Dan Qiu and 5 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Construction of a Risk Model for Colon Cancer Prognosis Based on Ubiquitin-Related Genes.The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Yinggang CheDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Dongbo JiangDepartment of Immunology, Basic Medicine School, Air-Force Medical University, Xi'an, China.
Leidi XuDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Yuanjie SunDepartment of Immunology, Basic Medicine School, Air-Force Medical University, Xi'an, China.
Yingtong WuDepartment of First Sanatorium, First Sanatorium of Air Force Healthcare Center for Special Services, Hangzhou, China.
Yang LiuShaanxi Provincial Center for Disease Control and Prevention, Xi'an, China.
Ning ChangDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Jiangjiang FanDepartment for AIDS Prevention and Control, Department of Thoracic Surgery, Tangdu Hospital, Air-Force Medical University, Xi'an, China.
Hangtian XiDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Dan QiuDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Qing JuDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Jingyu PanDepartment of Immunology, Basic Medicine School, Air-Force Medical University, Xi'an, China.
Yong ZhangDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Kun YangDepartment of Immunology, Basic Medicine School, Air-Force Medical University, Xi'an, China.
Jian ZhangDepartment of Pulmonary and Critical Care Medicine, Xijing Hospital, Air-Force Medical University, Xi'an, China.
Air Force Medical University · CNXijing Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Increasing evidence shows that the ubiquitin-proteasome system has a crucial impact on lung adenocarcinoma. However, reliable prognostic signatures based on ubiquitination and immune traits have not yet been established. Methods: Bioinformatics was performed to analyze the characteristic of ubiquitination in lung adenocarcinoma. Principal component analysis was employed to identify the difference between lung adenocarcinoma and adjacent tissue. The ubiquitin prognostic risk model was constructed by multivariate Cox regression and least absolute shrinkage and selection operator regression based on the public database The Cancer Genome Atlas, with evaluation of the time-dependent receiver operating characteristic curve. A variety of algorithms was used to analyze the immune traits of model stratification. Meanwhile, the drug response sensitivity for subgroups was predicted by the "pRRophetic" package based on the database of the Cancer Genome Project. Results: The expression of ubiquitin genes was different in the tumor and in the adjacent tissue. The ubiquitin model was superior to the clinical indexes, and four validation datasets verified the prognostic effect. Additionally, the stratification of the model reflected distinct immune landscapes and mutation traits. The low-risk group was infiltrating plenty of immune cells and highly expressed major histocompatibility complex and immune genes, which illustrated that these patients could benefit from immune treatment. The high-risk group showed higher mutation and tumor mutation burden. Integrating the tumor mutation burden and the immune score revealed the patient's discrepancy between survival and drug response. Finally, we discovered that the drug targeting ubiquitin and proteasome would be a beneficial prospective treatment for lung adenocarcinoma. Conclusion: The ubiquitin trait could reflect the prognosis of lung adenocarcinoma, and it might shed light on the development of novel ubiquitin biomarkers and targeted therapy for lung adenocarcinoma.

Indexed as

Adenocarcinoma of LungLung NeoplasmsBiomarkers, TumorGene Expression ProfilingGene Expression Regulation, NeoplasticHumansProspective StudiesProteasome Endopeptidase ComplexTranscriptomeUbiquitinationUbiquitinsBiomarkers, TumorProteasome Endopeptidase ComplexUbiquitinsdrug responsegenome mutationimmune infiltrationprognostic modelubiquitination

Identifiers

PMID35281055
PMCPMC8913715
OpenAlexW4214606652

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.