Evidence map›Paper›PMID 35277499›Full record

ArticleNature communications2022

Genotyping-by-sequencing-based identification of Arabidopsis pattern recognition receptor RLP32 recognizing proteobacterial translation initiation factor IF1.

Li Fan, Katja Fröhlich, Eric Melzer, Rory N Pruitt, Isabell Albert, Lisha Zhang, Anna Joe, Chenlei Hua, Yanyue Song, Markus Albert and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 35 citations in OpenAlex.

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  11. LRR Receptor-like Protein in Rapeseed Confers Resistance toInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 5 countries.

Li Fan *Center of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.
Katja Fröhlich *Center of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0002-9491-5927
Eric Melzer *Center of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.
Rory N PruittCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.
Isabell AlbertCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0003-2223-496X
Lisha ZhangCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0002-8203-2369
Anna JoeCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.
Chenlei HuaCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.
Yanyue SongCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.
Markus AlbertCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0003-4729-2453
Sang-Tae KimDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.ORCID http://orcid.org/0000-0003-1645-6021
Detlef WeigelDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Cyril ZipfelInstitute of Plant and Microbial Biology, Zürich-Basel Plant Science Center, University of Zürich, Zürich, Switzerland.ORCID http://orcid.org/0000-0003-4935-8583
Eunyoung ChaeDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany. dbsce@nus.edu.sg.ORCID http://orcid.org/0000-0002-0889-9837
Andrea A GustCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany. andrea.gust@zmbp.uni-tuebingen.de.ORCID http://orcid.org/0000-0003-0466-2792
Thorsten NürnbergerCenter of Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany. nuernberger@uni-tuebingen.de.ORCID http://orcid.org/0000-0002-7804-7170
University of Tübingen · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DEMax Planck Institute for Developmental Biology · DENational University of Singapore · SGUniversity of Johannesburg · ZAUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activation of plant pattern-triggered immunity (PTI) relies on the recognition of microbe-derived structures, termed patterns, through plant-encoded surface-resident pattern recognition receptors (PRRs). We show that proteobacterial translation initiation factor 1 (IF1) triggers PTI in Arabidopsis thaliana and related Brassicaceae species. Unlike for most other immunogenic patterns, IF1 elicitor activity cannot be assigned to a small peptide epitope, suggesting that tertiary fold features are required for IF1 receptor activation. We have deployed natural variation in IF1 sensitivity to identify Arabidopsis leucine-rich repeat (LRR) receptor-like protein 32 (RLP32) as IF1 receptor using a restriction site-associated DNA sequencing approach. RLP32 confers IF1 sensitivity to rlp32 mutants, IF1-insensitive Arabidopsis accessions and IF1-insensitive Nicotiana benthamiana, binds IF1 specifically and forms complexes with LRR receptor kinases SOBIR1 and BAK1 to mediate signaling. Similar to other PRRs, RLP32 confers resistance to Pseudomonas syringae, highlighting an unexpectedly complex array of bacterial pattern sensors within a single plant species.

Indexed as

ArabidopsisArabidopsis ProteinsProkaryotic Initiation FactorsReceptors, Pattern RecognitionGenotypePlant DiseasesPlant ImmunityProteobacteriaPseudomonas syringaeArabidopsis ProteinsProkaryotic Initiation FactorsReceptors, Pattern Recognition

Identifiers

PMID35277499
PMCPMC8917236
OpenAlexW4220899085

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.