Evidence map›Paper›PMID 35273366›Full record

ArticleNature ecology & evolution2022

Innate immune pathways act synergistically to constrain RNA virus evolution in Drosophila melanogaster.

Vanesa Mongelli, Sebastian Lequime, Athanasios Kousathanas, Valérie Gausson, Hervé Blanc, Jared Nigg, Lluis Quintana-Murci, Santiago F Elena, Maria-Carla Saleh

Open access · bronzeAbstract read
In one paragraph

Article in Nature ecology & evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Frontiers in cellular and infection microbiology · 2025
    Article
  4. IntegratingFrontiers in pharmacology · 2025
    Article
  5. Review
  6. Article
  7. Article
  8. Article
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 4 countries.

Vanesa MongelliViruses and RNA Interference Unit, Institut Pasteur, CNRS, Paris, France.
Sebastian LequimeCluster of Microbial Ecology, Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands.ORCID http://orcid.org/0000-0002-3140-0651
Athanasios KousathanasHuman Evolutionary Genetic Unit, Institut Pasteur, CNRS, Paris, France.ORCID http://orcid.org/0000-0001-6265-6521
Valérie GaussonViruses and RNA Interference Unit, Institut Pasteur, CNRS, Paris, France.
Hervé BlancViruses and RNA Interference Unit, Institut Pasteur, CNRS, Paris, France.
Jared NiggViruses and RNA Interference Unit, Institut Pasteur, CNRS, Paris, France.
Lluis Quintana-MurciHuman Evolutionary Genetic Unit, Institut Pasteur, CNRS, Paris, France.
Santiago F ElenaInstituto de Biología Integrativa de Sistemas (CSIC-Universitat de València), València, Spain. santiago.elena@csic.es.ORCID http://orcid.org/0000-0001-8249-5593
Maria-Carla SalehViruses and RNA Interference Unit, Institut Pasteur, CNRS, Paris, France. carla.saleh@pasteur.fr.ORCID http://orcid.org/0000-0001-8593-4117
Centre National de la Recherche Scientifique · FRSanta Fe Institute · USUniversity of Groningen · NL

Funding

European Research Council 615220
6 · The paper itself

Abstract

Host-pathogen interactions impose recurrent selective pressures that lead to constant adaptation and counter-adaptation in both competing species. Here, we sought to study this evolutionary arms-race and assessed the impact of the innate immune system on viral population diversity and evolution, using Drosophila melanogaster as model host and its natural pathogen Drosophila C virus (DCV). We isogenized eight fly genotypes generating animals defective for RNAi, Imd and Toll innate immune pathways as well as pathogen-sensing and gut renewal pathways. Wild-type or mutant flies were then orally infected with DCV and the virus was serially passaged ten times via reinfection in naive flies. Viral population diversity was studied after each viral passage by high-throughput sequencing and infection phenotypes were assessed at the beginning and at the end of the evolution experiment. We found that the absence of any of the various immune pathways studied increased viral genetic diversity while attenuating virulence. Strikingly, these effects were observed in a range of host factors described as having mainly antiviral or antibacterial functions. Together, our results indicate that the innate immune system as a whole and not specific antiviral defence pathways in isolation, generally constrains viral diversity and evolution.

Indexed as

Drosophila ProteinsRNA VirusesAnimalsAntiviral AgentsDicistroviridaeDrosophila melanogasterImmunity, InnateAntiviral AgentsDrosophila Proteins

Identifiers

PMID35273366
PMCPMC7612704
OpenAlexW4221090258

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.