Evidence map›Paper›PMID 35273140›Full record

ArticleCell death & disease2022

MESH1 knockdown triggers proliferation arrest through TAZ repression.

Tianai Sun, Chien-Kuang Cornelia Ding, Yuning Zhang, Yang Zhang, Chao-Chieh Lin, Jianli Wu, Yasaman Setayeshpour, Si'Ana Coggins, Caitlin Shepard, Everardo Macias and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Tianai Sun *Department of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0001-6668-4220
Chien-Kuang Cornelia Ding *Department of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.
Yuning ZhangCenter for Genomic and Computational Biology, Duke University, Durham, NC, 27708, USA.
Yang ZhangDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.
Chao-Chieh LinDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0001-5890-9004
Jianli WuDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.
Yasaman SetayeshpourDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.
Si'Ana CogginsCenter for Drug Discovery, Department of Pediatrics, School of Medicine, Emory University, Atlanta, GA, 30322, USA.
Caitlin ShepardCenter for Drug Discovery, Department of Pediatrics, School of Medicine, Emory University, Atlanta, GA, 30322, USA.
Everardo MaciasDepartment of Pathology, Duke University, Durham, NC, 27708, USA.
Baek KimCenter for Drug Discovery, Department of Pediatrics, School of Medicine, Emory University, Atlanta, GA, 30322, USA.
Pei ZhouDepartment of Biochemistry, Duke University School of Medicine, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0002-7823-3416
Raluca GordânDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA.
Jen-Tsan ChiDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, 27710, USA. jentsan.chi@duke.edu.ORCID http://orcid.org/0000-0003-3433-903X
Duke University · USEmory University · US

Funding

Lentivirus Replication Strategy and PathogenesisR01AI136581 · NIAID · EMORY UNIVERSITY · PI Baek Kim · 2018 to 2026
$3.9M
SAMHD1 mediated dNTP regulation and HIV in myeloid cellsR01AI162633 · NIAID · EMORY UNIVERSITY · PI Baek Kim · 2021 to 2026
$2.7M
Biochemical and functional investigation of the novel enzymatic activities of MESH1R01GM124062 · NIGMS · DUKE UNIVERSITY · PI CHI, JEN-TSAN ASHLEY, ZHOU, PEI · 2018 to 2021
$2.0M
The regulation dephosphorylated-CoA-capped RNA and innate immunity by MESH1R21AI149205 · NIAID · DUKE UNIVERSITY · PI CHI, JEN-TSAN ASHLEY · 2020 to 2021
$439k
NIAID NIH HHS R01 AI136581NIAID NIH HHS R01 AI162633NIAID NIH HHS R21 AI149205NIGMS NIH HHS R01 GM124062
6 · The paper itself

Abstract

All organisms are constantly exposed to various stresses, necessitating adaptive strategies for survival. In bacteria, the main stress-coping mechanism is the stringent response triggered by the accumulation of "alarmone" (p)ppGpp to arrest proliferation and reprogram transcriptome. While mammalian genomes encode MESH1-the homolog of the (p)ppGpp hydrolase SpoT, current knowledge about its function remains limited. We found MESH1 expression tended to be higher in tumors and associated with poor patient outcomes. Consistently, MESH1 knockdown robustly inhibited proliferation, depleted dNTPs, reduced tumor sphere formation, and retarded xenograft growth. These antitumor phenotypes associated with MESH1 knockdown were accompanied by a significantly altered transcriptome, including the repressed expression of TAZ, a HIPPO coactivator, and proliferative gene. Importantly, TAZ restoration mitigated many anti-growth phenotypes of MESH1 knockdown, including proliferation arrest, reduced sphere formation, tumor growth inhibition, dNTP depletion, and transcriptional changes. Furthermore, TAZ repression was associated with the histone hypo-acetylation at TAZ regulatory loci due to the induction of epigenetic repressors HDAC5 and AHRR. Together, MESH1 knockdown in human cells altered the genome-wide transcriptional patterns and arrested proliferation that mimicked the bacterial stringent response through the epigenetic repression of TAZ expression.

Indexed as

Guanosine PentaphosphateTranscription FactorsAcetylationAnimalsCell ProliferationHumansMammalsGuanosine PentaphosphateTranscription Factors

Identifiers

PMID35273140
PMCPMC8913805
OpenAlexW4220779890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.