Evidence map›Paper›PMID 35273078›Full record

ArticleLife science alliance2022

Conserved exchange of paralog proteins during neuronal differentiation.

Domenico Di Fraia, Mihaela Anitei, Marie-Therese Mackmull, Luca Parca, Laura Behrendt, Amparo Andres-Pons, Darren Gilmour, Manuela Helmer Citterich, Christoph Kaether, Martin Beck and 1 more

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Domenico Di FraiaLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.
Mihaela AniteiLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.
Marie-Therese MackmullEidgenössische Technische Hochschule (ETH) Zürich Inst. f. Molekulare Systembiologie, Zürich, Switzerland.
Luca ParcaDepartment of Biology, University of Tor Vergata, Rome, Italy.ORCID 0000-0002-0924-8518
Laura BehrendtLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.
Amparo Andres-PonsEuropean Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0001-5801-4024
Darren GilmourDepartment of Molecular Life Sciences, University of Zurich, Zürich, Switzerland.
Manuela Helmer CitterichDepartment of Biology, University of Tor Vergata, Rome, Italy.ORCID 0000-0001-9530-7504
Christoph KaetherLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany.
Martin BeckDepartment of Molecular Sociology, Max Planck Institute of Biophysics, Frankfurt am Main, Germany.
Alessandro OriLeibniz Institute on Aging-Fritz Lipmann Institute, Jena, Germany alessandro.ori@leibniz-fli.de.ORCID 0000-0002-3046-0871
Leibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DEUniversity of Rome Tor Vergata · ITETH Zurich · CHEuropean Molecular Biology Laboratory · DEMax Planck Institute of Biophysics · DEUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene duplication enables the emergence of new functions by lowering the evolutionary pressure that is posed on the ancestral genes. Previous studies have highlighted the role of specific paralog genes during cell differentiation, for example, in chromatin remodeling complexes. It remains unexplored whether similar mechanisms extend to other biological functions and whether the regulation of paralog genes is conserved across species. Here, we analyze the expression of paralogs across human tissues, during development and neuronal differentiation in fish, rodents and humans. Whereas ∼80% of paralog genes are co-regulated, a subset of paralogs shows divergent expression profiles, contributing to variability of protein complexes. We identify 78 substitutions of paralog pairs that occur during neuronal differentiation and are conserved across species. Among these, we highlight a substitution between the paralogs SEC23A and SEC23B members of the COPII complex. Altering the ratio between these two genes via RNAi-mediated knockdown is sufficient to influence neuron differentiation. We propose that remodeling of the vesicular transport system via paralog substitutions is an evolutionary conserved mechanism enabling neuronal differentiation.

Indexed as

Biological EvolutionGene DuplicationAnimals

Identifiers

PMID35273078
PMCPMC8917807
OpenAlexW4226086748

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.