Evidence map›Paper›PMID 35271582›Full record

ArticlePloS one2022

Transcriptomic, proteomic, metabolomic, and functional genomic approaches of Brassica napus L. during salt stress.

Jiabin Shu, Xiao Ma, Hua Ma, Qiurong Huang, Ye Zhang, Mei Guan, Chunyun Guan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 37 citations in OpenAlex.

  1. Advanced breeding techniques inPlant signaling & behavior · 2026
    Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Progress on Salt Tolerance inPlants (Basel, Switzerland) · 2024
    Review
  17. Article
  18. Article
  19. Multi-omics Analysis of YoungPhenomics (Cham, Switzerland) · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jiabin ShuThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.ORCID 0000-0002-2438-549X
Xiao MaThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.
Hua MaThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.
Qiurong HuangThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.
Ye ZhangThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.
Mei GuanThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.
Chunyun GuanThe Oilseed Crop Research Institute, National Oilseed Crop Improvement Center (Hunan), Hunan Agricultural University, Hunan, China.
Hunan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Environmental abiotic stresses limit plant growth, development, and reproduction. This study aims to reveal the response of Brassica napus to salt stress. Here, transcriptomics, metabolomics, and proteomics analysis were performed on 15 Brassica napus leave samples treated with salt at different times. Through functional enrichment analyzing the differentially expressed genes (DEGs), differential metabolites (DMs) and differentially expressed proteins (DEPs), the key factors that dominate Brassica napus response to salt stress were identified. The results showed that the two key hormones responding to salt stress were Abscisic acid (ABA) and jasmonic acid (JA). Salt stress for 24h is an important milestone. Brassica napus adjusted multiple pathways at 24h to avoid over-response to salt stress and cause energy consumption. The increased expression in BnPP2C is tangible evidence. In response to salt stress, JA and ABA work together to reduce the damage caused by salt stress in Brassica napus. The increased expression of all BnJAZs after salt stress highlighted the function of JA that cannot be ignored responding to salt stress. In addition, some metabolites, such as N-acetyl-5-hydroxytryptamine, L-Cysteine and L-(+)-Arginine, play a critical role in maintaining the balance of ROS. Proteins like catalase-3, cysteine desulfurase, HSP90 and P450_97A3 were the most critical differential proteins in response to salt stress. These findings of this study provide data support for Brassica napus breeding.

Indexed as

Brassica napusAbscisic AcidGene Expression Regulation, PlantGenomicsMetabolomicsPlant BreedingPlant ProteinsProteomicsSalt StressStress, PhysiologicalTranscriptomeAbscisic AcidPlant Proteins

Identifiers

PMID35271582
PMCPMC8912142
OpenAlexW4220950319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.