Evidence map›Paper›PMID 35270047›Full record

ArticlePlants (Basel, Switzerland)2022

A Core Set of Snap Bean Genotypes Established by Phenotyping a Large Panel Collected in Europe.

Carmen García-Fernández, Maria Jurado, Ana Campa, Creola Brezeanu, Valérie Geffroy, Elena Bitocchi, Roberto Papa, Juan Jose Ferreira

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Genetic control of pod morphological traits and pod edibility in a common bean RIL population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Carmen García-FernándezPlant Genetic Group, Regional Service for Agrofood Research and Development (SERIDA), 33300 Villaviciosa, Spain.ORCID 0000-0002-0664-796X
Maria JuradoPlant Genetic Group, Regional Service for Agrofood Research and Development (SERIDA), 33300 Villaviciosa, Spain.ORCID 0000-0002-9776-7296
Ana CampaPlant Genetic Group, Regional Service for Agrofood Research and Development (SERIDA), 33300 Villaviciosa, Spain.ORCID 0000-0003-3970-9079
Creola BrezeanuStațiunea de Cercetare Dezvoltare Pentru Legumicultură, 600388 Bacău, Romania.ORCID 0000-0002-3352-3081
Valérie GeffroyUniversité Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), 91405 Orsay, France.
Elena BitocchiDepartment of Agricultural, Food and Environmental Sciences, Marche Polytechnic University, Via Brecce Bianche, 60131 Ancona, Italy.
Roberto PapaDepartment of Agricultural, Food and Environmental Sciences, Marche Polytechnic University, Via Brecce Bianche, 60131 Ancona, Italy.ORCID 0000-0001-9598-3131
Juan Jose FerreiraPlant Genetic Group, Regional Service for Agrofood Research and Development (SERIDA), 33300 Villaviciosa, Spain.ORCID 0000-0002-8782-8868

Funding

Agencia Estatal de Investigación, Gobierno de España PRE2019-091249European Union 774244
6 · The paper itself

Abstract

Snap beans are a group of bean cultivars grown for their edible immature pods. The objective of this work was to characterize the diversity of pod phenotypes in a snap bean panel (SBP), comprising 311 lines collected in Europe, and establish a core set (Core-SBP) with the maximum diversity of pod phenotypes. Phenotyping of the SBP was carried out over two seasons based on 14 quantitative pod dimension traits along with three qualitative traits: pod color, seed coat color, and growth habit. Phenotypes were grouped into 54 classes using a hierarchical method, and a Core-SBP with one line per phenotype class was established. A further field-based evaluation of the Core-SBP revealed higher diversity index values than those obtained for the SBP. The Core-SBP was also genotyped using 24 breeder-friendly DNA markers tagging 21 genomic regions previously associated with pod trait control. Significant marker-trait associations were found for 11 of the 21 analyzed regions as well as the locus fin. The established Core-SBP was a first attempt to classify snap bean cultivars based on pod morphology and constituted a valuable source of characteristics for future breeding programs and genetic analysis.

Indexed as

core collectionsdiversitygenotypingPhaseolus vulgaris L.phenotypingpod traitsQTL validation

Identifiers

PMID35270047
PMCPMC8912712

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.