Evidence map›Paper›PMID 35269714›Full record

ArticleInternational journal of molecular sciences2022

Quantitative Proteomics Reveals Molecular Network Driving Stromal Cell Differentiation: Implications for Corneal Wound Healing.

Krishnatej Nishtala, Trailokyanath Panigrahi, Rohit Shetty, Dhanananajay Kumar, Pooja Khamar, Rajiv R Mohan, Vrushali Deshpande, Arkasubhra Ghosh

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Krishnatej NishtalaGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.ORCID 0000-0001-8410-9553
Trailokyanath PanigrahiGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Rohit ShettyCornea and Refractive Services, Narayana Nethralaya, Bangalore 560010, India.
Dhanananajay KumarGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Pooja KhamarCornea and Refractive Services, Narayana Nethralaya, Bangalore 560010, India.
Rajiv R MohanHarry S. Truman Memorial Veterans' Hospital, Columbia, MO 65201, USA.ORCID 0000-0002-1857-4200
Vrushali DeshpandeGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Arkasubhra GhoshGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.ORCID 0000-0002-6570-5891
Narayana Nethralaya · INMissouri College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The differentiation of keratocytes to fibroblasts and myofibroblasts is an essential requisite during corneal wound closure. The aim of this study is to uncover factors involved in differentiation-dependent alteration in the protein profile of human corneal stromal cells using quantitative proteomics. Human corneal fibroblasts were cultured and differentiated into keratocytes in serum-free media and myofibroblasts through treatment with TGF-β. The protein cell lysates from the donors were tryptic and were digested and labeled using a 3-plex iTRAQ kit. The labeled peptides were subjected to LCMS analysis. Biological functional analysis revealed a set of crucial proteins involved in the differentiation of human corneal stromal cells which were found to be significantly enriched. The selected proteins were further validated by immunohistochemistry. Quantitative proteomics identified key differentially expressed proteins which are involved in cellular signaling pathways. Proteins involved in integrin signaling (Ras-RAP1b, TLN and FN) and SLIT-ROBO pathways (PFN1, CAPR1, PSMA5) as well as extracellular matrix proteins (SERPINH1, SPARC, ITGβ1, CRTAP) showed enhanced expression in corneal fibroblasts and myofibroblasts compared to keratocytes, indicating their possible role in wound healing. Corneal stromal cell differentiation is associated with the activation of diverse molecular pathways critical for the repair of fibroblasts and myofibroblasts. Identified proteins such as profilin 1 and talin could play a tentative role in corneal healing and serve as a potential target to treat corneal fibrosis.

Indexed as

Corneal InjuriesProteomicsCell DifferentiationCells, CulturedCorneaFibroblastsHumansProfilinsStromal CellsWound HealingPFN1 protein, humanProfilinsactin cytoskeletoncalcium signalingcorneafibroblastsintegrin signalingkeratocytesLCMSmyofibroblastsquantitative proteomicsSLIT-ROBO signalingTGF-βwound healing

Identifiers

PMID35269714
PMCPMC8910342
OpenAlexW4214513251

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.