Evidence map›Paper›PMID 35269711›Full record

ArticleInternational journal of molecular sciences2022

Protein Expression of AEBP1, MCM4, and FABP4 Differentiate Osteogenic, Adipogenic, and Mesenchymal Stromal Stem Cells.

Thorben Sauer, Giulia Facchinetti, Michael Kohl, Justyna M Kowal, Svitlana Rozanova, Julia Horn, Hagen Schmal, Ivo Kwee, Arndt-Peter Schulz, Sonja Hartwig and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identifying Biomarkers for Osteogenic Potency Assay Development.Advances in experimental medicine and biology · 2023
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Thorben SauerSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.ORCID 0000-0002-4511-6037
Giulia FacchinettiSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.
Michael KohlSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.
Justyna M KowalDepartment of Endocrinology and Metabolism, University Hospital of Odense, J.B. Winsløws Vej 25, 5230 Odense, Denmark.
Svitlana RozanovaSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.
Julia HornSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.
Hagen SchmalDepartment of Orthopedics and Traumatology, Odense University Hospital, Odense, J.B. Winsløws Vej 4, 5000 Odense, Denmark.ORCID 0000-0002-8801-2385
Ivo KweeBigOmics Analytics SA, 6500 Bellinzona, Switzerland.
Arndt-Peter SchulzFraunhofer Research Institution for Individualized and Cell-Based Medical Engineering Luebeck, Moenkhofer Weg 239a, 23562 Luebeck, Germany.ORCID 0000-0002-4927-549X
Sonja HartwigGerman Center for Diabetes Research (DZD), 85764 Muenchen, Germany.ORCID 0000-0002-5225-6804
Moustapha KassemDepartment of Endocrinology and Metabolism, University Hospital of Odense, J.B. Winsløws Vej 25, 5230 Odense, Denmark.
Jens K HabermannSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.
Timo GemollSection for Translational Surgical Oncology and Biobanking, Department of Surgery, University Hospital Schleswig-Holstein, University of Luebeck, Campus Luebeck, Ratzeburger Allee 160, 23562 Luebeck, Germany.ORCID 0000-0001-7400-5240
University Hospital Schleswig-Holstein · DEOdense University Hospital · DKDeutsches Diabetes-Zentrum e.V. · DEFraunhofer Research Institution for Individualized and Cell-Based Medical Engineering · DEUniversity of Freiburg · DE

Funding

Interreg 5a Germany-Denmark 16-1.0-15
6 · The paper itself

Abstract

Mesenchymal stem cells (MSCs) gain an increasing focus in the field of regenerative medicine due to their differentiation abilities into chondrocytes, adipocytes, and osteoblastic cells. However, it is apparent that the transformation processes are extremely complex and cause cellular heterogeneity. The study aimed to characterize differences between MSCs and cells after adipogenic (AD) or osteoblastic (OB) differentiation at the proteome level. Comparative proteomic profiling was performed using tandem mass spectrometry in data-independent acquisition mode. Proteins were quantified by deep neural networks in library-free mode and correlated to the Molecular Signature Database (MSigDB) hallmark gene set collections for functional annotation. We analyzed 4108 proteins across all samples, which revealed a distinct clustering between MSCs and cell differentiation states. Protein expression profiling identified activation of the

Indexed as

Mesenchymal Stem CellsOsteogenesisAdipogenesisCell DifferentiationProteomicsdata-independent acquisition mass spectrometrydifferentiation markershuman stromal/mesenchymal stem cellsmachine learningprotein profilingSWATH

Identifiers

PMID35269711
PMCPMC8910760
OpenAlexW4214756476

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.