Evidence map›Paper›PMID 35268233›Full record

ArticleAnimals : an open access journal from MDPI2022

Assessing Genomic Diversity and Selective Pressures in Bohai Black Cattle Using Whole-Genome Sequencing Data.

Xiaohui Ma, Haijian Cheng, Yangkai Liu, Luyang Sun, Ningbo Chen, Fugui Jiang, Wei You, Zhangang Yang, Baoheng Zhang, Enliang Song and 1 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Animals : an open access journal from MDPI, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 20 citations in OpenAlex.

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  18. The Role ofInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Xiaohui MaInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Shandong Key Lab of Animal Disease Control and Breeding, Jinan 250100, China.
Haijian ChengInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Shandong Key Lab of Animal Disease Control and Breeding, Jinan 250100, China.
Yangkai LiuCollege of Animal Science and Technology, Northwest A&F University, Xianyang 712100, China.
Luyang SunCollege of Animal Science and Technology, Northwest A&F University, Xianyang 712100, China.
Ningbo ChenCollege of Animal Science and Technology, Northwest A&F University, Xianyang 712100, China.
Fugui JiangInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Shandong Key Lab of Animal Disease Control and Breeding, Jinan 250100, China.
Wei YouInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Shandong Key Lab of Animal Disease Control and Breeding, Jinan 250100, China.
Zhangang YangHuaXing Bohai Black Cattle Co., Ltd., Binzhou 256600, China.
Baoheng ZhangWudi Animal Husbandry and Veterinary Service Management Center of Binzhou City, Binzhou 256600, China.
Enliang SongInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Shandong Key Lab of Animal Disease Control and Breeding, Jinan 250100, China.ORCID 0000-0003-3107-1912
Chuzhao LeiCollege of Animal Science and Technology, Northwest A&F University, Xianyang 712100, China.
Shandong Academy of Agricultural Sciences · CNNorthwest A&F University · CN

Funding

China Agriculture Research System of MOF and MARA (CARS-37), Breakthrough breeding of high quality and efficient new beef cattle variety (2020LZGC014). (CARS-37）（2020LZGC014）
6 · The paper itself

Abstract

Bohai Black cattle are one of the well-known cattle breeds with black coat color in China, which are cultivated for beef. However, no study has conducted a comprehensive analysis of genomic diversity and selective pressures in Bohai Black cattle. Here, we performed a comprehensive analysis of genomic variation in 10 Bohai Black cattle (five newly sequenced and five published) and the published whole-genome sequencing (WGS) data of 50 cattle representing five "core" cattle populations. The population structure analysis revealed that Bohai Black cattle harbored the ancestry with European taurine, Northeast Asian taurine, and Chinese indicine. The Bohai Black cattle demonstrated relatively high genomic diversity from the other cattle breeds, as indicated by the nucleotide diversity (pi), the expected heterozygosity (H

Indexed as

Bohai Black cattleChinese cattlecoat colorgenomic diversitymeat qualitypopulation structureselection signaturesSNPswhole-genome resequencing

Identifiers

PMID35268233
PMCPMC8909316
OpenAlexW4221028592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.