Evidence map›Paper›PMID 35268207›Full record

ArticleAnimals : an open access journal from MDPI2022

Integration of mRNA and miRNA Profiling Reveals Heterosis in

Wei Xiao, Binglin Chen, Jun Wang, Zhiying Zou, Chenghui Wang, Dayu Li, Jinglin Zhu, Jie Yu, Hong Yang

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  5. The myxozoan parasiteParasitology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Wei XiaoKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture, National Demonstration Center for Experimental Fisheries Science Education, Shanghai Engineering Research Center of Aquaculture, Shanghai Ocean University, Shanghai 201306, China.ORCID 0000-0003-3842-8670
Binglin ChenFreshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China.
Jun WangKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture, National Demonstration Center for Experimental Fisheries Science Education, Shanghai Engineering Research Center of Aquaculture, Shanghai Ocean University, Shanghai 201306, China.ORCID 0000-0002-6591-3316
Zhiying ZouFreshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China.
Chenghui WangKey Laboratory of Freshwater Aquatic Genetic Resources, Ministry of Agriculture, National Demonstration Center for Experimental Fisheries Science Education, Shanghai Engineering Research Center of Aquaculture, Shanghai Ocean University, Shanghai 201306, China.ORCID 0000-0002-6523-7610
Dayu LiFreshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China.
Jinglin ZhuFreshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China.
Jie YuFreshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China.
Hong YangFreshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China.
Chinese Academy of Fishery Sciences · CNShanghai Ocean University · CN

Funding

China Agriculture Research System CARS-46Chinese Academy of Fishery Sciences CAFS-2021JBFM03
6 · The paper itself

Abstract

Heterosis is a widespread biological phenomenon in fishes, in which hybrids have superior traits to parents. However, the underlying molecular basis for heterosis remains uncertain. Heterosis in growth and survival rates is apparent in hybrid tilapia (Oreochromis niloticus ♀ × O. aureus ♂). Comparisons of growth and hematological biochemical characteristics and mRNA and miRNA transcriptional analyses were performed in hybrid and parents tilapia stocks to investigate the underlying molecular basis for heterosis. Growth characteristics and hematological glucose and cholesterol parameters were significantly improved in hybrids. Of 3097 differentially expressed genes (DEGs) and 120 differentially expressed miRNAs (DEMs) identified among three stocks (O. niloticus, O. aureus, and hybrids), 1598 DEGs and 62 DEMs were non-additively expressed in hybrids. Both expression level dominance and overdominance patterns occurred for DEGs and DEMs, indicating that dominance and overdominance models are widespread in the transcriptional and post-transcriptional regulation of genes involved in growth, metabolism, immunity, and antioxidant capacity in hybrid tilapia. Moreover, potential negative regulation networks between DEMs and predicted target DEGs revealed that most DEGs from miRNA-mRNA pairs are up-regulated. Dominance and overdominance models in levels of transcriptome and miRNAome facilitate the integration of advantageous parental alleles into hybrids, contributing to heterosis of growth and improved survival. The present study provides new insights into molecular heterosis in hybrid tilapia, advancing our understanding of the complex mechanisms involved in this phenomenon in aquatic animals.

Indexed as

dominancegrowthheterosishybrid tilapiaoverdominancesurvival rate

Identifiers

PMID35268207
PMCPMC8909811
OpenAlexW4214919783

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.