Evidence map›Paper›PMID 35265561›Full record

ArticleCanadian journal of gastroenterology & hepatology

Identifying Potential New Gene Expression-Based Biomarkers in the Peripheral Blood Mononuclear Cells of Hepatitis B-Related Hepatocellular Carcinoma.

Vahdat Poortahmasebi, Ahmad Nejati, Mohammad Foad Abazari, Mohsen Nasiri Toosi, Azam Ghaziasadi, Nader Mohammadzadeh, Ahmad Tavakoli, Azam Khamseh, Navid Momenifar, Omid Gholizadeh and 2 more

Open access · goldAbstract read
In one paragraph

Article in Canadian journal of gastroenterology & hepatology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Vahdat PoortahmasebiInfectious and Tropical Diseases Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.ORCID https://orcid.org/0000-0001-5409-2121
Ahmad NejatiDepartment of Virology, School Public Health, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0003-2435-3065
Mohammad Foad AbazariResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-3383-8526
Mohsen Nasiri ToosiLiver Transplantation Research Center, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-6106-4265
Azam GhaziasadiResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-8595-9530
Nader MohammadzadehDepartment of Bacteriology and Virology, School of Medicine, Tabriz University of Medical Sciences, Tabriz, Iran.ORCID https://orcid.org/0000-0002-5668-905X
Ahmad TavakoliResearch Center of Pediatric Infectious Diseases, Institute of Immunology and Infectious Diseases, Iran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0003-1857-0610
Azam KhamsehResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-8351-7210
Navid MomenifarHuman and Animal Cell Bank, Iranian Biological Resource Center (IBRC), ACECR, Tehran, Iran.ORCID https://orcid.org/0000-0003-4801-0438
Omid GholizadehInfectious and Tropical Diseases Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.ORCID https://orcid.org/0000-0002-2208-6437
Mehdi NorouziResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-3560-9508
Seyed Mohammad JazayeriResearch Center for Clinical Virology, Tehran University of Medical Sciences, Tehran, Iran.ORCID https://orcid.org/0000-0002-2330-6921
Tehran University of Medical Sciences · IRTabriz University of Medical Sciences · IRAcademic Center for Education, Culture and Research · IRIran University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: The analysis of the gene expression of peripheral blood mononuclear cells (PBMCs) is important to clarify the pathogenesis of hepatocellular carcinoma (HCC) and the detection of suitable biomarkers. The purpose of this investigation was to use RNA-sequencing to screen the appropriate differentially expressed genes (DEGs) in the PBMCs for the HCC. Methods: The comprehensive transcriptome of extracted RNA of PBMC ( Results: Specifically, 13, 1262, and 1450 DEGs were identified for CHB, liver cirrhosis, and HCC, when compared with the healthy controls. GO enrichment analysis indicated that HCC is closely related to the immune response. Seven DEGs (TYMP, TYROBP, CD14, TGFBI, LILRA2, GNLY, and GZMB) were common to HCC, cirrhosis, and CHB when compared to healthy controls. The data revealed that the expressions of these 7 DEGs were consistent with those from the RNA-sequencing results. Also, the expressions of 7 representative genes that had higher sensitivity were obtained by receiver operating characteristic analysis, which indicated their important diagnostic accuracy for HBV-HCC. Conclusion: This study provides us with new horizons into the biological process and potential prospective clinical diagnosis and prognosis of HCC in the near future.

Indexed as

Carcinoma, HepatocellularHepatitis BHepatitis B, ChronicLiver NeoplasmsBiomarkersGene ExpressionHepatitis B virusHumansLeukocytes, MononuclearLiver CirrhosisProspective StudiesRNABiomarkersRNA

Identifiers

PMID35265561
PMCPMC8901362
OpenAlexW4214566608

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.