Evidence map›Paper›PMID 35264790›Full record

ArticleNature2022

Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.

Kazuki Saito, Hanna Kratzat, Annabelle Campbell, Robert Buschauer, A Maxwell Burroughs, Otto Berninghausen, L Aravind, Rachel Green, Roland Beckmann, Allen R Buskirk

Open access · greenAbstract read
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 113 citations in OpenAlex.

  1. Pyrrolysine supply and demand shapes the translational landscape inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Translation factors that keep the ribosome Pro-active.Microbiology and molecular biology reviews : MMBR · 2026
    Review
  3. Collided ribosomes are rescued by the endonuclease Rae1 andbioRxiv : the preprint server for biology · 2026
    Article
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Kazuki Saito *Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, USA.
Hanna Kratzat *Gene Center and Department of Biochemistry, University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0001-5849-6131
Annabelle CampbellDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, USA.
Robert BuschauerGene Center and Department of Biochemistry, University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0002-5794-4841
A Maxwell BurroughsComputational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, USA.ORCID http://orcid.org/0000-0002-2229-8771
Otto BerninghausenGene Center and Department of Biochemistry, University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0002-9255-0522
L AravindComputational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, USA.
Rachel GreenDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, USA.ORCID http://orcid.org/0000-0001-9337-2003
Roland BeckmannGene Center and Department of Biochemistry, University of Munich, Munich, Germany. beckmann@genzentrum.lmu.de.ORCID http://orcid.org/0000-0003-4291-3898
Allen R BuskirkDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, USA. buskirk@jhmi.edu.ORCID http://orcid.org/0000-0003-2720-6896
Johns Hopkins University · USNational Institutes of Health · USGene Therapy Laboratory · FRHoward Hughes Medical Institute · US

Funding

BIOCHEMISTRY, CELLULAR AND MOLECULAR BIOLOGY PROGRAMT32GM007445 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GREEN, RACHEL · 1985 to 2021
$24.1M
Evolutionary Analysis and Comparative Genomics of Protein SuperfamiliesZIALM594244 · NLM · NATIONAL LIBRARY OF MEDICINE · PI ARAVIND, L · 2009 to 2025
$20.3M
Molecular mechanisms of ribosome pausing and the cellular responseR37GM059425 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GREEN, RACHEL · 2014 to 2023
$3.5M
The role of collisions in rescuing stalled ribosomes in bacteriaR01GM136960 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Allen Rowdon Buskirk · 2021 to 2026
$1.9M
NIGMS NIH HHS R01 GM136960NIGMS NIH HHS R37 GM059425NIGMS NIH HHS T32 GM007445
6 · The paper itself

Abstract

Ribosome rescue pathways recycle stalled ribosomes and target problematic mRNAs and aborted proteins for degradation

Indexed as

Escherichia coliRibosomesBacteriaCryoelectron MicroscopyProtein BiosynthesisRNA, BacterialRNA, MessengerRNA, BacterialRNA, Messenger

Identifiers

PMID35264790
PMCPMC8934283
OpenAlexW4220675341

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.