Evidence map›Paper›PMID 35264712›Full record

ArticleCommunications biology2022

Approach to map nanotopography of cell surface receptors.

Christian Franke, Tomáš Chum, Zuzana Kvíčalová, Daniela Glatzová, Gregor Jörg Gentsch, Alvaro Rodriguez, Dominic A Helmerich, Lucas Herdly, Harsha Mavila, Otakar Frank and 3 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Cryosectioning-enhanced super-resolution microscopy for single-protein imaging across cells and tissues.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Pre-organized landscape of T cell surface.Frontiers in immunology · 2023
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Christian Franke *Institute of Applied Optics and Biophysics, Friedrich Schiller University Jena, Jena, Germany. christian.franke@uni-jena.de.ORCID http://orcid.org/0000-0002-0326-7232
Tomáš Chum *Department of Biophysical Chemistry, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.
Zuzana KvíčalováDepartment of Biophysical Chemistry, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.
Daniela GlatzováDepartment of Biophysical Chemistry, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.
Gregor Jörg GentschInstitute of Applied Optics and Biophysics, Friedrich Schiller University Jena, Jena, Germany.ORCID http://orcid.org/0000-0003-4790-9388
Alvaro RodriguezDepartment of Electrochemical Materials, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0003-3703-6712
Dominic A HelmerichDepartment of Biotechnology and Biophysics, Biocenter, University of Würzburg, Würzburg, Germany.
Lucas HerdlyDepartment of Physics, SUPA, University of Strathclyde, Glasgow, UK.
Harsha MavilaDepartment of Biophysical Chemistry, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.
Otakar FrankDepartment of Electrochemical Materials, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-9661-6250
Tomáš BrdičkaLaboratory of Leukocyte Signalling, Institute of Molecular Genetics, Czech Academy of Sciences, Prague, Czech Republic.
Sebastian van de LindeDepartment of Physics, SUPA, University of Strathclyde, Glasgow, UK. s.vandelinde@strath.ac.uk.ORCID http://orcid.org/0000-0002-7977-840X
Marek CebecauerDepartment of Biophysical Chemistry, J. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Prague, Czech Republic. marek.cebecauer@jh-inst.cas.cz.ORCID http://orcid.org/0000-0002-4606-1218
Czech Academy of Sciences, J. Heyrovský Institute of Physical Chemistry · CZCzech Academy of Sciences · CZFriedrich Schiller University Jena · DEUniversity of Strathclyde · GBUniversity of Würzburg · DE

Funding

British Heart FoundationGrantová Agentura České Republiky (Grant Agency of the Czech Republic) 19-0704SRCUK | Engineering and Physical Sciences Research Council (EPSRC) 2031229RCUK | Engineering and Physical Sciences Research Council (EPSRC) EP/N509760/1Wellcome TrustWellcome Trust (Wellcome) SBF003\1163
6 · The paper itself

Abstract

Cells communicate with their environment via surface receptors, but nanoscopic receptor organization with respect to complex cell surface morphology remains unclear. This is mainly due to a lack of accessible, robust and high-resolution methods. Here, we present an approach for mapping the topography of receptors at the cell surface with nanometer precision. The method involves coating glass coverslips with glycine, which preserves the fine membrane morphology while allowing immobilized cells to be positioned close to the optical surface. We developed an advanced and simplified algorithm for the analysis of single-molecule localization data acquired in a biplane detection scheme. These advancements enable direct and quantitative mapping of protein distribution on ruffled plasma membranes with near isotropic 3D nanometer resolution. As demonstrated successfully for CD4 and CD45 receptors, the described workflow is a straightforward quantitative technique to study molecules and their interactions at the complex surface nanomorphology of differentiated metazoan cells.

Indexed as

NanotechnologyReceptors, Cell SurfaceAnimalsCell MembraneReceptors, Cell Surface

Identifiers

PMID35264712
PMCPMC8907216
OpenAlexW4220785072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.