Evidence map›Paper›PMID 35264636›Full record

ArticleScientific reports2022

Genic and non-genic SNP contributions to additive and dominance genetic effects in purebred and crossbred pig traits.

Mahshid Mohammadpanah, Ahmad Ayatollahi Mehrgardi, Hélène Gilbert, Catherine Larzul, Marie-José Mercat, Ali Esmailizadeh, Mehdi Momen, Llibertat Tusell

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Mahshid MohammadpanahDepartment of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman (SBUK), Kerman, Iran.
Ahmad Ayatollahi MehrgardiDepartment of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman (SBUK), Kerman, Iran. mehrgardi@uk.ac.ir.
Hélène GilbertGenPhySE, Université de Toulouse, INRAE, 31326, Castanet-Tolosan, France.
Catherine LarzulGenPhySE, Université de Toulouse, INRAE, 31326, Castanet-Tolosan, France.
Marie-José MercatIFIP/Alliance R&D, La Motte au Vicomte, 35651, Le Rheu, France.
Ali EsmailizadehDepartment of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman (SBUK), Kerman, Iran.
Mehdi MomenDepartment of Surgical Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, WI, 53706, USA.
Llibertat TusellGenPhySE, Université de Toulouse, INRAE, 31326, Castanet-Tolosan, France.
Shahid Bahonar University of Kerman · IRGénétique Physiologie et Systèmes d'Elevage · FRInstitut du Porc · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRUniversité Fédérale de Toulouse Midi-Pyrénées · FRUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present research has estimated the additive and dominance genetic variances of genic and intergenic segments for average daily gain (ADG), backfat thickness (BFT) and pH of the semimembranosus dorsi muscle (PHS). Further, the predictive performance using additive and additive dominance models in a purebred Piétrain (PB) and a crossbred (Piétrain × Large White, CB) pig population was assessed. All genomic regions contributed equally to the additive and dominance genetic variations and lead to the same predictive ability that did not improve with the inclusion of dominance genetic effect and inbreeding in the models. Using all SNPs available, additive genotypic correlations between PB and CB performances for the three traits were high and positive (> 0.83) and dominance genotypic correlation was very inaccurate. Estimates of dominance genotypic correlations between all pairs of traits in both populations were imprecise but positive for ADG-BFT in CB and BFT-PHS in PB and CB with a high probability (> 0.98). Additive and dominance genotypic correlations between BFT and PHS were of different sign in both populations, which could indicate that genes contributing to the additive genetic progress in both traits would have an antagonistic effect when used for exploiting dominance effects in planned matings.

Indexed as

Models, GeneticPolymorphism, Single NucleotideAnimalsGenomeGenotypePhenotypeSwine

Identifiers

PMID35264636
PMCPMC8907311
OpenAlexW4220670882

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.