Evidence map›Paper›PMID 35260883›Full record

ArticleThe Journal of antimicrobial chemotherapy2022

Ancient and recent differences in the intrinsic susceptibility of Mycobacterium tuberculosis complex to pretomanid.

Anna Bateson, Julio Ortiz Canseco, Timothy D McHugh, Adam A Witney, Silke Feuerriegel, Matthias Merker, Thomas A Kohl, Christian Utpatel, Stefan Niemann, Sönke Andres and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 64 citations in OpenAlex.

  1. Trial
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  3. Antimicrobial agents and chemotherapy · 2026
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  15. Antimicrobial agents and chemotherapy · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 12 institutions in 9 countries.

Anna BatesonCentre for Clinical Microbiology, University College London, Royal Free Campus, London, UK.
Julio Ortiz CansecoCentre for Clinical Microbiology, University College London, Royal Free Campus, London, UK.
Timothy D McHughCentre for Clinical Microbiology, University College London, Royal Free Campus, London, UK.
Adam A WitneyInstitute of Infection and Immunity, St George's, University of London, London, UK.
Silke FeuerriegelMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Matthias MerkerMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Thomas A KohlMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Christian UtpatelMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Stefan NiemannMolecular and Experimental Mycobacteriology, Research Center Borstel, Borstel, Germany.
Sönke AndresNational and WHO Supranational Reference Laboratory for Tuberculosis, Research Center Borstel, Borstel, Germany.
Katharina KranzerDepartment of Clinical Research, Faculty of Infectious & Tropical Diseases, London School of Hygiene & Tropical Medicine, London, UK.
Florian P MaurerGerman Center for Infection Research, Partner site Hamburg-Lübeck-Borstel-Riems, Germany.
Arash GhodousiIRCCS San Raffaele Scientific Institute, Milan, Italy.
Emanuele BorroniIRCCS San Raffaele Scientific Institute, Milan, Italy.
Daniela Maria CirilloIRCCS San Raffaele Scientific Institute, Milan, Italy.
Maria WijkanderSupranational Reference Laboratory for Tuberculosis, Public Health Agency of Sweden, Solna, Sweden.
Juan C ToroSupranational Reference Laboratory for Tuberculosis, Public Health Agency of Sweden, Solna, Sweden.
Ramona GroenheitSupranational Reference Laboratory for Tuberculosis, Public Health Agency of Sweden, Solna, Sweden.
Jim WerngrenSupranational Reference Laboratory for Tuberculosis, Public Health Agency of Sweden, Solna, Sweden.
Diana MachadoUnidade de Microbiologia Médica, Global Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisbon, Portugal.
Miguel ViveirosUnidade de Microbiologia Médica, Global Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lisbon, Portugal.ORCID 0000-0001-9676-6251
Robin M WarrenDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Frederick SirgelDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Anzaan DippenaarDSI-NRF Centre of Excellence for Biomedical Tuberculosis Research/South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Claudio U KöserDepartment of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0002-0232-846X
Eugene SunTB Alliance, New York City, NY, USA.
Juliano TimmTB Alliance, New York City, NY, USA.
German Center for Infection Research · DEPublic Health Agency of Sweden · SESouth African Medical Research Council · ZAThe Royal Free Hospital · GBVita-Salute San Raffaele University · ITResearch Center Borstel - Leibniz Lung Center · DETB Alliance · USUniversidade Nova de Lisboa · PTLondon School of Hygiene & Tropical Medicine · GBSt George's, University of London · GBUniversität Hamburg · DEUniversity of Cambridge · GB

Funding

Australia's Department of Foreign Affairs and TradeBill & Melinda Gates FoundationCommonwealth and Development OfficeFederal Ministry of Education and ResearchForeign, Commonwealth and Development OfficeFWO G0F8316NGermany's Federal Ministry of Education and ResearchIrish AidMinistry of Foreign AffairsNetherlands Ministry of Foreign AffairsSouth African Medical Research CouncilTuberculosis Omics Research ConsortiumUnited Kingdom Department of HealthUnited Kingdom ForeignUnited States Agency for International Development
6 · The paper itself

Abstract

objectivesTo develop a robust phenotypic antimicrobial susceptibility testing (AST) method with a correctly set breakpoint for pretomanid (Pa), the most recently approved anti-tuberculosis drug.

methodsThe Becton Dickinson Mycobacterial Growth Indicator Tube™ (MGIT) system was used at six laboratories to determine the MICs of a phylogenetically diverse collection of 356 Mycobacterium tuberculosis complex (MTBC) strains to establish the epidemiological cut-off value for pretomanid. MICs were correlated with WGS data to study the genetic basis of differences in the susceptibility to pretomanid.

resultsWe observed ancient differences in the susceptibility to pretomanid among various members of MTBC. Most notably, lineage 1 of M. tuberculosis, which is estimated to account for 28% of tuberculosis cases globally, was less susceptible than lineages 2, 3, 4 and 7 of M. tuberculosis, resulting in a 99th percentile of 2 mg/L for lineage 1 compared with 0.5 mg/L for the remaining M. tuberculosis lineages. Moreover, we observed that higher MICs (≥8 mg/L), which probably confer resistance, had recently evolved independently in six different M. tuberculosis strains. Unlike the aforementioned ancient differences in susceptibility, these recent differences were likely caused by mutations in the known pretomanid resistance genes.

conclusionsIn light of these findings, the provisional critical concentration of 1 mg/L for MGIT set by EMA must be re-evaluated. More broadly, these findings underline the importance of considering the global diversity of MTBC during clinical development of drugs and when defining breakpoints for AST.

Indexed as

Mycobacterium tuberculosisNitroimidazolesTuberculosisAntitubercular AgentsHumansMicrobial Sensitivity TestsAntitubercular AgentsNitroimidazolespretomanid

Identifiers

PMID35260883
PMCPMC9155602
OpenAlexW4214714440

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.