Evidence map›Paper›PMID 35260847›Full record

ArticleNature structural & molecular biology2022

Ensemble cryo-EM reveals conformational states of the nsp13 helicase in the SARS-CoV-2 helicase replication-transcription complex.

James Chen, Qi Wang, Brandon Malone, Eliza Llewellyn, Yakov Pechersky, Kashyap Maruthi, Ed T Eng, Jason K Perry, Elizabeth A Campbell, David E Shaw and 1 more

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. SARS-CoV-2 NSP8-Derived Peptide Effectively Suppresses the Activity of Helicase NSP13.Computational and structural biotechnology journal · 2026
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

James Chen *Laboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0002-2311-003X
Qi Wang *D. E. Shaw Research, New York, NY, USA.
Brandon Malone *Laboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0001-7752-9824
Eliza LlewellynLaboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA.
Yakov PecherskyD. E. Shaw Research, New York, NY, USA.ORCID http://orcid.org/0000-0002-3170-1622
Kashyap MaruthiThe National Resource for Automated Molecular Microscopy, Simons Electron Microscopy Center, New York Structural Biology Center, New York, NY, USA.
Ed T EngThe National Resource for Automated Molecular Microscopy, Simons Electron Microscopy Center, New York Structural Biology Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-8014-7269
Jason K PerryGilead Sciences, Inc., Foster City, CA, USA.ORCID http://orcid.org/0000-0001-5492-0652
Elizabeth A CampbellLaboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA.
David E ShawD. E. Shaw Research, New York, NY, USA. David.Shaw@DEShawResearch.com.ORCID http://orcid.org/0000-0001-8265-5761
Seth A DarstLaboratory of Molecular Biophysics, The Rockefeller University, New York, NY, USA. darst@rockefeller.edu.ORCID http://orcid.org/0000-0002-8241-3153

Funding

NCCAT: National Center for CryoEM Access and Training- Supplement for Windows 10 and FFIU24GM129539 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2018 to 2023
$53.9M
TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2012 to 2021
$14.7M
Structure, function, and regulation of the bacterial transcription cycleR35GM118130 · NIGMS · ROCKEFELLER UNIVERSITY · PI DARST, SETH A. · 2016 to 2025
$8.9M
Structure, function, and inhibition of the SARS-CoV-2 replication-transcription complexR01AI161278 · NIAID · ROCKEFELLER UNIVERSITY · PI Seth A. Darst · 2021 to 2026
$3.9M
Structure/function analyses of essential mycobacterial transcription regulatorsR01GM114450 · NIGMS · ROCKEFELLER UNIVERSITY · PI CAMPBELL, ELIZABETH A · 2015 to 2023
$3.4M
NIAID NIH HHS R01 AI161278NIGMS NIH HHS P41 GM103310NIGMS NIH HHS R01 GM114450NIGMS NIH HHS R35 GM118130NIGMS NIH HHS U24 GM129539
6 · The paper itself

Abstract

The SARS-CoV-2 nonstructural proteins coordinate genome replication and gene expression. Structural analyses revealed the basis for coupling of the essential nsp13 helicase with the RNA-dependent RNA polymerase (RdRp) where the holo-RdRp and RNA substrate (the replication-transcription complex or RTC) associated with two copies of nsp13 (nsp13

Indexed as

COVID-19SARS-CoV-2Cryoelectron MicroscopyHumansRNA HelicasesViral Nonstructural ProteinsVirus ReplicationRNA HelicasesViral Nonstructural Proteins

Identifiers

PMID35260847
PMCPMC8935131

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.